RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 TIMM21Q9BVV7 248 aa5.69□□□□□ -1.5
CNN3-205ENST00000474409 IGKV3OR2-268A0A0C4DH90 116 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 A0A1B0GUV1 79 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.68□□□□□ -1.5
CNN3-205ENST00000474409 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 FABP4P15090 132 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
CNN3-205ENST00000474409 PAPPA-AS1Q5QFB9 102 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 CLPSL2Q6UWE3 100 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 TEX43Q6ZNM6 134 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 ERASQ7Z444 233 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 HIST3H2BBQ8N257 126 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 C10orf126Q8N4M7 172 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 C2orf88Q9BSF0 95 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 Q9H8V8 135 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 PYGO1Q9Y3Y4 419 aa5.68□□□□□ -1.5
CNN3-205ENST00000474409 IGLV4-60A0A075B6I1 120 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 IGLV4-3A0A075B6K6 122 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 TRAV9-2A0A087WT02 112 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 C5orf52A6NGY3 159 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 H0Y8G0 127 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 NPSP0C0P6 89 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 TTC32Q5I0X7 151 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 IFI27L1Q96BM0 104 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 KLK12Q9UKR0 248 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 CSDC2Q9Y534 153 aaKnown RBP5.67□□□□□ -1.5
CNN3-205ENST00000474409 VPS13DQ5THJ4 4388 aa5.67□□□□□ -1.5
CNN3-205ENST00000474409 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 MRPS36P82909 103 aaKnown RBP5.66□□□□□ -1.5
CNN3-205ENST00000474409 REG3AQ06141 175 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 LINC00173Q6ZV60 143 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 LINC00269Q8N2A0 174 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 BAALCQ8WXS3 180 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 UBE2WQ96B02 151 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 PACRGQ96M98 296 aaPredicted RBP5.66□□□□□ -1.5
CNN3-205ENST00000474409 OPRPNQ99935 248 aaPredicted RBP5.66□□□□□ -1.5
CNN3-205ENST00000474409 VCX2Q9H322 139 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 CDC42SE2Q9NRR3 84 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
CNN3-205ENST00000474409 PRSS1P07477 247 aa5.65□□□□□ -1.5
CNN3-205ENST00000474409 HIST1H2BLQ99880 126 aa5.65□□□□□ -1.5
CNN3-205ENST00000474409 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
CNN3-205ENST00000474409 Q9HAA7 133 aa5.65□□□□□ -1.5
CNN3-205ENST00000474409 DNAH1Q9P2D7 4330 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 TRAV13-1A0A0B4J241 112 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 K7EP13 123 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 KRTDAPP60985 99 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 PMVKQ15126 192 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 ZC2HC1BQ5TFG8 222 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 AMELXQ99217 191 aa5.64□□□□□ -1.51
CNN3-205ENST00000474409 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 IGLV10-54A0A075B6I4 117 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 SS18Q15532 418 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 MIAQ16674 131 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 RMI2Q96E14 147 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 C1orf43Q9BWL3 253 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 KRTAP1-5Q9BYS1 174 aa5.63□□□□□ -1.51
CNN3-205ENST00000474409 TRAV12-1A0A0B4J245 112 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 LINC00959A0A1B0GUT2 108 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 C20orf202A1L168 122 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 IBA57-AS1B1ANH7 110 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 SYS1-DBNDD2H3BUS1 97 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 M0R2N4 97 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 C3orf79P0CE67 100 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 ENHOQ6UWT2 76 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 CHAC1Q9BUX1 264 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 CST9LQ9H4G1 147 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 PRR34Q9NV39 138 aa5.62□□□□□ -1.51
CNN3-205ENST00000474409 CHTOPQ9Y3Y2 248 aaKnown RBP5.62□□□□□ -1.51
CNN3-205ENST00000474409 KMT2AQ03164 3969 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 IGKV2D-24A0A075B6R9 120 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 TRAV8-4A0A0B4J246 113 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 LCE6AA0A183 80 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 PRSS29PA6NIE9 313 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 F8VRH5 84 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 CCL25O15444 150 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 XCL1P47992 114 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 UBE2D1P51668 147 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 SEC11AP67812 179 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 CHCHD10Q8WYQ3 142 aaPredicted RBP5.61□□□□□ -1.51
CNN3-205ENST00000474409 PMCHL2Q9BQD1 86 aa5.61□□□□□ -1.51
CNN3-205ENST00000474409 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
CNN3-205ENST00000474409 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
CNN3-205ENST00000474409 A0A0J9YXV3 536 aa5.6□□□□□ -1.51
CNN3-205ENST00000474409 IGLC3P0DOY3 106 aa5.6□□□□□ -1.51
CNN3-205ENST00000474409 HERVK_113P63121 156 aa5.6□□□□□ -1.51
CNN3-205ENST00000474409 ODF1Q14990 250 aa5.6□□□□□ -1.51
CNN3-205ENST00000474409 MRPL35Q9NZE8 188 aaKnown RBP5.6□□□□□ -1.51
CNN3-205ENST00000474409 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
CNN3-205ENST00000474409 TINCRA0A1B0GVN0 87 aa5.59□□□□□ -1.51
CNN3-205ENST00000474409 GAGE12HA6NDE8 117 aa5.59□□□□□ -1.51
CNN3-205ENST00000474409 PSCAO43653 123 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms