RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 S100A2P29034 98 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 EMP1P54849 157 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 NUTF2P61970 127 aaKnown RBP3.18□□□□□ -1.9
UFD1-207ENST00000474226 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
UFD1-207ENST00000474226 PTH2Q96A98 100 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 CHCHD1Q96BP2 118 aaKnown RBP3.18□□□□□ -1.9
UFD1-207ENST00000474226 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 OVOL2Q9BRP0 275 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 SMIM2Q9BVW6 85 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 CELA1Q9UNI1 258 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
UFD1-207ENST00000474226 DNAH3Q8TD57 4116 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 STAB2Q8WWQ8 2551 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 K7EIL1 84 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 PPBPP02775 128 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 POLR2KP53803 58 aaKnown RBP3.17□□□□□ -1.9
UFD1-207ENST00000474226 DAZ2Q13117 558 aaKnown RBP3.17□□□□□ -1.9
UFD1-207ENST00000474226 JOSD1Q15040 202 aaPredicted RBP3.17□□□□□ -1.9
UFD1-207ENST00000474226 ZNF56Q15929 161 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 RRN3P1Q2M238 152 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 Q6ZR54 194 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 FA2HQ7L5A8 372 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 Q8N8P6 123 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 Q8NAQ8 132 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 C11orf45Q8TAV5 145 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 C16orf74Q96GX8 76 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 C12orf57Q99622 126 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 PMCHL2Q9BQD1 86 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 SPXQ9BT56 116 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 TMEM70Q9BUB7 260 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 MAP1LC3AQ9H492 121 aa3.17□□□□□ -1.9
UFD1-207ENST00000474226 HUWE1Q7Z6Z7 4374 aaKnown RBP3.16□□□□□ -1.9
UFD1-207ENST00000474226 IGHV3-38A0A0C4DH36 116 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 KIR2DL5BA0A0G2JN68 375 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 KIR2DL5BA0A0G2JPC4 375 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 TRBV6-5A0A0K0K1A5 114 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 SDHAF1A6NFY7 115 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 DNAH10OSP0CZ25 163 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 SMIM6P0DI80 62 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 KRTDAPP60985 99 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 MAJINQ3KP22 176 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 HIGD2BQ4VC39 106 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 FAM222AQ5U5X8 452 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 SMIM15Q7Z3B0 74 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 KIR2DL5AQ8N109 375 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 OR11H2Q8NH07 326 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 KIR2DL5BQ8NHK3 375 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 FAM104AQ969W3 186 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 C18orf15Q96N68 181 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 C20orf78Q9BR46 151 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 EDA2RQ9HAV5 297 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 TP73-AS1Q9UF72 201 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 LAMTOR2Q9Y2Q5 125 aa3.16□□□□□ -1.9
UFD1-207ENST00000474226 MUC4Q99102 2169 aa3.15□□□□□ -1.9
UFD1-207ENST00000474226 SORL1Q92673 2214 aa3.15□□□□□ -1.9
UFD1-207ENST00000474226 TRAV4A0A0B4J268 109 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 TRBV27A0A0K0K1C4 114 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 A8MU10 97 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 A8MWV9 139 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 LEPROTL1O95214 131 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 HBDP02042 147 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 SMIM17P0DL12 118 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 LINC00694P0DN24 101 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 DEFB130BP0DP73 79 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 DEFB130AP0DP74 79 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 FCER1GP30273 86 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 APOC4P55056 127 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 KRTAP12-2P59991 146 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 RPL39P62891 51 aaKnown RBP3.15□□□□□ -1.91
UFD1-207ENST00000474226 RPL32P62910 135 aaKnown RBP3.15□□□□□ -1.91
UFD1-207ENST00000474226 LGALS9BQ3B8N2 356 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 KPRPQ5T749 579 aaPredicted RBP3.15□□□□□ -1.91
UFD1-207ENST00000474226 ZFP2Q6ZN57 461 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 SBSPONQ8IVN8 264 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 ATOH7Q8N100 152 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 SLC25A29Q8N8R3 303 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 OR4C5Q8NGB2 326 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 ST20Q9HBF5 79 aa3.15□□□□□ -1.91
UFD1-207ENST00000474226 NXT2Q9NPJ8 142 aaKnown RBP3.15□□□□□ -1.91
UFD1-207ENST00000474226 H0Y8G0 127 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 LAGE3Q14657 143 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 CEMP1Q6PRD7 247 aaPredicted RBP3.14□□□□□ -1.91
UFD1-207ENST00000474226 C2orf66Q6UXQ4 117 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 TEX43Q6ZNM6 134 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 ZNF664Q8N3J9 261 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 VSIG2Q96IQ7 327 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 CHCHD7Q9BUK0 85 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 PRO1933Q9H354 126 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
UFD1-207ENST00000474226 TRGV2A0A075B6R0 118 aa3.13□□□□□ -1.91
UFD1-207ENST00000474226 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
UFD1-207ENST00000474226 IGKV2-29A2NJV5 120 aaPredicted RBP3.13□□□□□ -1.91
UFD1-207ENST00000474226 SMIM9A6NGZ8 99 aa3.13□□□□□ -1.91
UFD1-207ENST00000474226 IGIPA6NJ69 53 aa3.13□□□□□ -1.91
UFD1-207ENST00000474226 K7EQD1 137 aa3.13□□□□□ -1.91
UFD1-207ENST00000474226 UBE2D3P61077 147 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms