RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 IGKV2-29A2NJV5 120 aaPredicted RBP12.39□□□□□ -0.43
CCDC171-206ENST00000474193 CRPP02741 224 aa12.39□□□□□ -0.43
CCDC171-206ENST00000474193 ANGP03950 147 aaKnown RBP12.38□□□□□ -0.43
CCDC171-206ENST00000474193 RBX1P62877 108 aa12.38□□□□□ -0.43
CCDC171-206ENST00000474193 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
CCDC171-206ENST00000474193 RNASEKQ6P5S7 137 aaKnown RBP12.38□□□□□ -0.43
CCDC171-206ENST00000474193 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
CCDC171-206ENST00000474193 RYR1P21817 5038 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 A0A1B0GUV1 79 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 COLCA2A8K830 154 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 K7EMI3 77 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 ESDP10768 282 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 KRTAP10-1P60331 282 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 Q8N976 141 aa12.37□□□□□ -0.43
CCDC171-206ENST00000474193 FGF6P10767 208 aa12.36□□□□□ -0.43
CCDC171-206ENST00000474193 ZNF25P17030 456 aaPredicted RBP12.36□□□□□ -0.43
CCDC171-206ENST00000474193 IFI27P40305 119 aaPredicted RBP12.36□□□□□ -0.43
CCDC171-206ENST00000474193 ORMDL2Q53FV1 153 aa12.36□□□□□ -0.43
CCDC171-206ENST00000474193 DGAT2L7PQ6IED9 249 aa12.36□□□□□ -0.43
CCDC171-206ENST00000474193 C1orf43Q9BWL3 253 aa12.36□□□□□ -0.43
CCDC171-206ENST00000474193 EPM2AB3EWF7 344 aa12.35□□□□□ -0.43
CCDC171-206ENST00000474193 G0S2P27469 103 aa12.35□□□□□ -0.43
CCDC171-206ENST00000474193 BAALCQ8WXS3 180 aa12.35□□□□□ -0.43
CCDC171-206ENST00000474193 DNAH5Q8TE73 4624 aa12.34□□□□□ -0.43
CCDC171-206ENST00000474193 LECT2O14960 151 aa12.34□□□□□ -0.43
CCDC171-206ENST00000474193 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
CCDC171-206ENST00000474193 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
CCDC171-206ENST00000474193 KRTAP4-5Q9BYR2 181 aa12.34□□□□□ -0.43
CCDC171-206ENST00000474193 HSPG2P98160 4391 aa12.33□□□□□ -0.44
CCDC171-206ENST00000474193 TRGC2P03986 189 aa12.33□□□□□ -0.44
CCDC171-206ENST00000474193 OR5A1Q8NGJ0 315 aa12.33□□□□□ -0.44
CCDC171-206ENST00000474193 XGP55808 180 aa12.32□□□□□ -0.44
CCDC171-206ENST00000474193 RAB5BP61020 215 aa12.32□□□□□ -0.44
CCDC171-206ENST00000474193 C14orf177Q52M58 125 aa12.32□□□□□ -0.44
CCDC171-206ENST00000474193 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
CCDC171-206ENST00000474193 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
CCDC171-206ENST00000474193 MIAQ16674 131 aa12.31□□□□□ -0.44
CCDC171-206ENST00000474193 MRPL52Q86TS9 123 aaKnown RBP12.31□□□□□ -0.44
CCDC171-206ENST00000474193 C18orf32Q8TCD1 76 aa12.31□□□□□ -0.44
CCDC171-206ENST00000474193 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.3□□□□□ -0.44
CCDC171-206ENST00000474193 CYSLTR1Q9Y271 337 aa12.3□□□□□ -0.44
CCDC171-206ENST00000474193 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
CCDC171-206ENST00000474193 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
CCDC171-206ENST00000474193 REG3AQ06141 175 aa12.29□□□□□ -0.44
CCDC171-206ENST00000474193 TIMM21Q9BVV7 248 aa12.29□□□□□ -0.44
CCDC171-206ENST00000474193 SPANXA1Q9NS26 97 aa12.29□□□□□ -0.44
CCDC171-206ENST00000474193 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
CCDC171-206ENST00000474193 APOBP04114 4563 aaKnown RBP12.28□□□□□ -0.44
CCDC171-206ENST00000474193 LINC00614P0C842 121 aa12.28□□□□□ -0.44
CCDC171-206ENST00000474193 WFDC2Q14508 124 aa12.28□□□□□ -0.44
CCDC171-206ENST00000474193 CLPSL2Q6UWE3 100 aa12.28□□□□□ -0.44
CCDC171-206ENST00000474193 ENHOQ6UWT2 76 aa12.28□□□□□ -0.44
CCDC171-206ENST00000474193 C2orf66Q6UXQ4 117 aa12.28□□□□□ -0.44
CCDC171-206ENST00000474193 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
CCDC171-206ENST00000474193 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
CCDC171-206ENST00000474193 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.45
CCDC171-206ENST00000474193 LINC01549A6NIU2 74 aa12.27□□□□□ -0.45
CCDC171-206ENST00000474193 BAGE3Q86Y29 109 aa12.27□□□□□ -0.45
CCDC171-206ENST00000474193 ZNF664Q8N3J9 261 aa12.27□□□□□ -0.45
CCDC171-206ENST00000474193 PRR34Q9NV39 138 aa12.27□□□□□ -0.45
CCDC171-206ENST00000474193 CDC42SE2Q9NRR3 84 aa12.26□□□□□ -0.45
CCDC171-206ENST00000474193 TRAV8-4A0A0B4J246 113 aa12.25□□□□□ -0.45
CCDC171-206ENST00000474193 LINC01546A6NGU7 62 aa12.25□□□□□ -0.45
CCDC171-206ENST00000474193 PCLOQ9Y6V0 5065 aa12.24□□□□□ -0.45
CCDC171-206ENST00000474193 SMR3BP02814 79 aaPredicted RBP12.24□□□□□ -0.45
CCDC171-206ENST00000474193 PYGO1Q9Y3Y4 419 aa12.24□□□□□ -0.45
CCDC171-206ENST00000474193 Q5VSD8 79 aa12.23□□□□□ -0.45
CCDC171-206ENST00000474193 Q6ZN92 141 aa12.23□□□□□ -0.45
CCDC171-206ENST00000474193 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
CCDC171-206ENST00000474193 CHCHD1Q96BP2 118 aaKnown RBP12.23□□□□□ -0.45
CCDC171-206ENST00000474193 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
CCDC171-206ENST00000474193 MRPS36P82909 103 aaKnown RBP12.22□□□□□ -0.45
CCDC171-206ENST00000474193 SS18Q15532 418 aa12.22□□□□□ -0.45
CCDC171-206ENST00000474193 PAPPA-AS1Q5QFB9 102 aa12.22□□□□□ -0.45
CCDC171-206ENST00000474193 SCGB3A1Q96QR1 104 aa12.22□□□□□ -0.45
CCDC171-206ENST00000474193 Q6ZUT4 128 aa12.21□□□□□ -0.45
CCDC171-206ENST00000474193 TMEM141Q96I45 108 aa12.21□□□□□ -0.45
CCDC171-206ENST00000474193 NPSP0C0P6 89 aa12.2□□□□□ -0.46
CCDC171-206ENST00000474193 INAFM2P0DMQ5 153 aa12.2□□□□□ -0.46
CCDC171-206ENST00000474193 RNASE13Q5GAN3 156 aaKnown RBP12.2□□□□□ -0.46
CCDC171-206ENST00000474193 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 C1orf196B1AJZ1 125 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 CCL25O15444 150 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 HSBP1O75506 76 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 HBDP02042 147 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 HAMPP81172 84 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 TEX43Q6ZNM6 134 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 ERASQ7Z444 233 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 TIMM17AQ99595 171 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 OPRPNQ99935 248 aaPredicted RBP12.19□□□□□ -0.46
CCDC171-206ENST00000474193 VCX2Q9H322 139 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
CCDC171-206ENST00000474193 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
CCDC171-206ENST00000474193 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
CCDC171-206ENST00000474193 C2orf88Q9BSF0 95 aa12.18□□□□□ -0.46
CCDC171-206ENST00000474193 IGIPA6NJ69 53 aa12.17□□□□□ -0.46
CCDC171-206ENST00000474193 IFITM10A6NMD0 228 aa12.17□□□□□ -0.46
CCDC171-206ENST00000474193 CHCHD10Q8WYQ3 142 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms