RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	HAMP	P81172	84 aa		-0.03	□□□□□ -2.41
BBX-223	ENST00000473542	TMEM170B	Q5T4T1	132 aa		-0.03	□□□□□ -2.41
BBX-223	ENST00000473542	KIF21A	Q7Z4S6	1674 aa		-0.03	□□□□□ -2.41
BBX-223	ENST00000473542	SHROOM2	Q13796	1616 aa		-0.03	□□□□□ -2.41
BBX-223	ENST00000473542	C10orf142	B7Z368	130 aa		-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	DLEU1	O43261	78 aa		-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	BCE1	O60756	84 aa		-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	MRPL54	Q6P161	138 aa	Known RBP	-0.04	□□□□□ -2.42
BBX-223	ENST00000473542		Q8IZM0	81 aa		-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	LINC01558	Q9Y6Z2	57 aa		-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	DMBT1	Q9UGM3	2413 aa	Predicted RBP	-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	AHCTF1	Q8WYP5	2266 aa		-0.04	□□□□□ -2.42
BBX-223	ENST00000473542	ERCC6L2	Q5T890	1561 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	SSPO	A2VEC9	5147 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	IGLC7	A0M8Q6	106 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	OOSP1	A8MZH6	123 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	HMGN4	O00479	90 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542		Q5VSD8	79 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	MYOZ3	Q8TDC0	251 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	TSLP	Q969D9	159 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	MYOM1	P52179	1685 aa		-0.05	□□□□□ -2.42
BBX-223	ENST00000473542	ZNF236	Q9UL36	1845 aa		-0.06	□□□□□ -2.42
BBX-223	ENST00000473542	MYOM2	P54296	1465 aa		-0.06	□□□□□ -2.42
BBX-223	ENST00000473542	SBF2	Q86WG5	1849 aa		-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	UBE2L5P	A0A1B0GUS4	154 aa		-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	ATP5E	P56381	51 aa	Predicted RBP	-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	UBE2L3	P68036	154 aa	Known RBP	-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	C9orf153	Q5TBE3	101 aa		-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	TP53AIP1	Q9HCN2	124 aa		-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	IER3IP1	Q9Y5U9	82 aa		-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	SMG6	Q86US8	1419 aa	Known RBP	-0.07	□□□□□ -2.42
BBX-223	ENST00000473542	CUL7	Q14999	1698 aa		-0.08	□□□□□ -2.42
BBX-223	ENST00000473542	ROBO1	Q9Y6N7	1651 aa		-0.08	□□□□□ -2.42
BBX-223	ENST00000473542	SHANK2	Q9UPX8	1470 aa		-0.08	□□□□□ -2.42
BBX-223	ENST00000473542		Q6JHZ5	121 aa		-0.08	□□□□□ -2.42
BBX-223	ENST00000473542	SPTBN2	O15020	2390 aa		-0.09	□□□□□ -2.42
BBX-223	ENST00000473542	RAPGEF6	Q8TEU7	1601 aa		-0.09	□□□□□ -2.42
BBX-223	ENST00000473542		A0A1B0GV90	55 aa		-0.09	□□□□□ -2.42
BBX-223	ENST00000473542		I3L2K1	104 aa		-0.09	□□□□□ -2.42
BBX-223	ENST00000473542	LINC00474	Q9P2X8	69 aa		-0.09	□□□□□ -2.42
BBX-223	ENST00000473542	CSMD3	Q7Z407	3707 aa		-0.09	□□□□□ -2.42
BBX-223	ENST00000473542	EIF4G3	O43432	1585 aa	Known RBP	-0.1	□□□□□ -2.42
BBX-223	ENST00000473542	DPH3P1	Q9H4G8	78 aa		-0.1	□□□□□ -2.43
BBX-223	ENST00000473542	ZNF292	O60281	2723 aa		-0.1	□□□□□ -2.43
BBX-223	ENST00000473542	FAM24A	A6NFZ4	105 aa		-0.11	□□□□□ -2.43
BBX-223	ENST00000473542	SFT2D2	O95562	160 aa		-0.11	□□□□□ -2.43
BBX-223	ENST00000473542	GNG4	P50150	75 aa		-0.11	□□□□□ -2.43
BBX-223	ENST00000473542	DEFB109B	Q30KR1	87 aa		-0.11	□□□□□ -2.43
BBX-223	ENST00000473542	CDC42SE2	Q9NRR3	84 aa		-0.11	□□□□□ -2.43
BBX-223	ENST00000473542	UBR5	O95071	2799 aa	Predicted RBP	-0.11	□□□□□ -2.43
BBX-223	ENST00000473542	C10orf71	Q711Q0	1435 aa		-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	CORT	O00230	105 aa		-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	SNAPC5	O75971	98 aa		-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	DCD	P81605	110 aa	Known RBP	-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	FAM167A-AS1	Q96KT0	104 aa		-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	UQCR10	Q9UDW1	63 aa		-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	PPRC1	Q5VV67	1664 aa	Known RBP	-0.12	□□□□□ -2.43
BBX-223	ENST00000473542	MGP	P08493	103 aa		-0.13	□□□□□ -2.43
BBX-223	ENST00000473542	C2orf88	Q9BSF0	95 aa		-0.13	□□□□□ -2.43
BBX-223	ENST00000473542	PSME4	Q14997	1843 aa		-0.13	□□□□□ -2.43
BBX-223	ENST00000473542	C2CD3	Q4AC94	2353 aa		-0.14	□□□□□ -2.43
BBX-223	ENST00000473542	CHKB-CPT1B	H3BT56	60 aa		-0.14	□□□□□ -2.43
BBX-223	ENST00000473542	PIGY	Q3MUY2	71 aa		-0.14	□□□□□ -2.43
BBX-223	ENST00000473542	TMEM203	Q969S6	136 aa		-0.14	□□□□□ -2.43
BBX-223	ENST00000473542	ABCA2	Q9BZC7	2435 aa		-0.14	□□□□□ -2.43
BBX-223	ENST00000473542	MAPKBP1	O60336	1514 aa		-0.14	□□□□□ -2.43
BBX-223	ENST00000473542	ARHGEF5	Q12774	1597 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	WNK2	Q9Y3S1	2297 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	CACNA1A	O00555	2505 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	WDR7	Q9Y4E6	1490 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	PAPPA	Q13219	1627 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	TRBV6-1	A0A0K0K1D8	114 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	SPRR1A	P35321	89 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	WHAMMP3	Q1A5X7	153 aa		-0.15	□□□□□ -2.43
BBX-223	ENST00000473542	NXT2	Q9NPJ8	142 aa	Known RBP	-0.15	□□□□□ -2.43
BBX-223	ENST00000473542		F6UZH7	168 aa		-0.16	□□□□□ -2.44
BBX-223	ENST00000473542	PPP3R1	P63098	170 aa		-0.16	□□□□□ -2.44
BBX-223	ENST00000473542	TMEM263	Q8WUH6	116 aa	Known RBP	-0.16	□□□□□ -2.44
BBX-223	ENST00000473542	SPRR4	Q96PI1	79 aa		-0.16	□□□□□ -2.44
BBX-223	ENST00000473542	HMGXB3	Q12766	1538 aa		-0.17	□□□□□ -2.44
BBX-223	ENST00000473542	SVBP	Q8N300	66 aa		-0.17	□□□□□ -2.44
BBX-223	ENST00000473542	SCAPER	Q9BY12	1400 aa		-0.17	□□□□□ -2.44
BBX-223	ENST00000473542	FAIM	Q9NVQ4	179 aa		-0.17	□□□□□ -2.44
BBX-223	ENST00000473542	NRK	Q7Z2Y5	1582 aa		-0.18	□□□□□ -2.44
BBX-223	ENST00000473542	GNG11	P61952	73 aa		-0.18	□□□□□ -2.44
BBX-223	ENST00000473542	EHBP1L1	Q8N3D4	1523 aa		-0.18	□□□□□ -2.44
BBX-223	ENST00000473542	DIP2C	Q9Y2E4	1556 aa		-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	NSD3	Q9BZ95	1437 aa		-0.19	□□□□□ -2.44
BBX-223	ENST00000473542		H3BQ15	152 aa		-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	IGLC1	P0CG04	106 aa		-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	MRPS10	P82664	201 aa	Known RBP	-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	AKAP6	Q13023	2319 aa		-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	FAM135A	Q9P2D6	1515 aa		-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	HUWE1	Q7Z6Z7	4374 aa	Known RBP	-0.19	□□□□□ -2.44
BBX-223	ENST00000473542	NCOR1	O75376	2440 aa		-0.2	□□□□□ -2.44
BBX-223	ENST00000473542	UBE2D3	P61077	147 aa		-0.2	□□□□□ -2.44
BBX-223	ENST00000473542	UBE2D2	P62837	147 aa		-0.2	□□□□□ -2.44
BBX-223	ENST00000473542	DEFB123	Q8N688	67 aa		-0.2	□□□□□ -2.44
BBX-223	ENST00000473542	GNG8	Q9UK08	70 aa		-0.2	□□□□□ -2.44
BBX-223	ENST00000473542	TET3	O43151	1660 aa		-0.21	□□□□□ -2.44

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