RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 SERP1Q9Y6X1 66 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 MYOM3Q5VTT5 1437 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 SPTA1P02549 2419 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 LRRC37A2A6NM11 1700 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 CEP152O94986 1710 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 COL6A3P12111 3177 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 PCLOQ9Y6V0 5065 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 MRC1P22897 1456 aa-0.42□□□□□ -2.48
CLCC1-208ENST00000473062 EP300Q09472 2414 aaPredicted RBP-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 NWD2Q9ULI1 1742 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 C10orf71Q711Q0 1435 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 LOC285095A0A1B0GVY8 99 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 RBM3P98179 157 aaKnown RBP-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 Q6AWC8 147 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 BAGE2Q86Y30 109 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 CFTRP13569 1480 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 WNK3Q9BYP7 1800 aa-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 PPRC1Q5VV67 1664 aaKnown RBP-0.43□□□□□ -2.48
CLCC1-208ENST00000473062 CHD8Q9HCK8 2581 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 GVINP1Q7Z2Y8 2422 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 NAIPQ13075 1403 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 CSPG4Q6UVK1 2322 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 FAM25AB3EWG3 89 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 FAM25CB3EWG5 89 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 FAM25GB3EWG6 89 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 F8VRH5 84 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 Q6JHZ5 121 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 ARL11Q969Q4 196 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 MGST2Q99735 147 aa-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 GOLGA4Q13439 2230 aaKnown RBP-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 FLNBO75369 2602 aaKnown RBP-0.44□□□□□ -2.48
CLCC1-208ENST00000473062 KDM3BQ7LBC6 1761 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 NF1P21359 2839 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 SHANK2Q9UPX8 1470 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 K7EQZ3 153 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 AMELXQ99217 191 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 DYNLRB1Q9NP97 96 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 CNOT1A5YKK6 2376 aaKnown RBP-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 USF3Q68DE3 2245 aa-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 URB1O60287 2271 aaKnown RBP-0.45□□□□□ -2.48
CLCC1-208ENST00000473062 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
CLCC1-208ENST00000473062 LOC105371267A0A1B0GV96 52 aa-0.46□□□□□ -2.48
CLCC1-208ENST00000473062 TNFP01375 233 aa-0.46□□□□□ -2.48
CLCC1-208ENST00000473062 SPRR2BP35325 72 aa-0.46□□□□□ -2.48
CLCC1-208ENST00000473062 ATRQ13535 2644 aa-0.46□□□□□ -2.48
CLCC1-208ENST00000473062 LRP6O75581 1613 aa-0.46□□□□□ -2.48
CLCC1-208ENST00000473062 HERC2O95714 4834 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 NEBP20929 6669 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 BCL9LQ86UU0 1499 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 COX6B1P14854 86 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 KRTAP19-8Q3LI54 63 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 CCDC58Q4VC31 144 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 Q8N8P6 123 aa-0.47□□□□□ -2.48
CLCC1-208ENST00000473062 I3L2K1 104 aa-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 BTG2P78543 158 aa-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 Q56UQ5 140 aa-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 MYO7BQ6PIF6 2116 aa-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 C8orf59Q8N0T1 100 aaPredicted RBP-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 FXYD6Q9H0Q3 95 aa-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 FLGP20930 4061 aaPredicted RBP-0.48□□□□□ -2.49
CLCC1-208ENST00000473062 TRBV7-3A0A075B6L6 115 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 SSSCA1O60232 199 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 IFNGP01579 166 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 MEIG1Q5JSS6 88 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 LINC00470Q9BZP3 86 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 NDUFA4L2Q9NRX3 87 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 WDR7Q9Y4E6 1490 aa-0.49□□□□□ -2.49
CLCC1-208ENST00000473062 SPINK4O60575 86 aa-0.5□□□□□ -2.49
CLCC1-208ENST00000473062 APOC2P02655 101 aa-0.5□□□□□ -2.49
CLCC1-208ENST00000473062 LINC01558Q9Y6Z2 57 aa-0.5□□□□□ -2.49
CLCC1-208ENST00000473062 PRDM2Q13029 1718 aa-0.5□□□□□ -2.49
CLCC1-208ENST00000473062 PLXNB2O15031 1838 aa-0.51□□□□□ -2.49
CLCC1-208ENST00000473062 LAMA5O15230 3695 aa-0.51□□□□□ -2.49
CLCC1-208ENST00000473062 WHAMMP3Q1A5X7 153 aa-0.51□□□□□ -2.49
CLCC1-208ENST00000473062 MYOZ3Q8TDC0 251 aa-0.51□□□□□ -2.49
CLCC1-208ENST00000473062 SPANXDQ9BXN6 97 aa-0.51□□□□□ -2.49
CLCC1-208ENST00000473062 MYH8P13535 1937 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 UNC13AQ9UPW8 1703 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 TGP01266 2768 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 SETD2Q9BYW2 2564 aaPredicted RBP-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 IGLC7A0M8Q6 106 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 MGPP08493 103 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 FGF7P21781 194 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 FAIMQ9NVQ4 179 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 STARD9Q9P2P6 4700 aa-0.52□□□□□ -2.49
CLCC1-208ENST00000473062 SFT2D2O95562 160 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 S100A12P80511 92 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 C1orf54Q8WWF1 131 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 LSM10Q969L4 123 aaKnown RBP-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 TSC22D3Q99576 134 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 LINC00472Q9H8W2 130 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 UQCR10Q9UDW1 63 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 SPEF2Q9C093 1822 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 UBR4Q5T4S7 5183 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 DNAH6Q9C0G6 4158 aa-0.53□□□□□ -2.49
CLCC1-208ENST00000473062 MXRA5Q9NR99 2828 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 USH2AO75445 5202 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 HYDINQ4G0P3 5121 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 M0R2T5 61 aa-0.54□□□□□ -2.5
CLCC1-208ENST00000473062 HMGN4O00479 90 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms