RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 MIEN1Q9BRT3 115 aa10.23□□□□□ -0.77
HIF3A-206ENST00000472815 H3BNG1 76 aa10.22□□□□□ -0.77
HIF3A-206ENST00000472815 FGF6P10767 208 aa10.22□□□□□ -0.77
HIF3A-206ENST00000472815 ZC2HC1BQ5TFG8 222 aa10.22□□□□□ -0.77
HIF3A-206ENST00000472815 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
HIF3A-206ENST00000472815 VSIG2Q96IQ7 327 aa10.22□□□□□ -0.77
HIF3A-206ENST00000472815 AMELXQ99217 191 aa10.22□□□□□ -0.77
HIF3A-206ENST00000472815 IGLC3P0DOY3 106 aa10.21□□□□□ -0.77
HIF3A-206ENST00000472815 DEFA6Q01524 100 aa10.21□□□□□ -0.77
HIF3A-206ENST00000472815 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.77
HIF3A-206ENST00000472815 HERVK_113P61574 105 aa10.21□□□□□ -0.78
HIF3A-206ENST00000472815 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.78
HIF3A-206ENST00000472815 CEMP1Q6PRD7 247 aaPredicted RBP10.2□□□□□ -0.78
HIF3A-206ENST00000472815 Q6ZTC4 211 aa10.2□□□□□ -0.78
HIF3A-206ENST00000472815 STPG4Q8N801 248 aa10.2□□□□□ -0.78
HIF3A-206ENST00000472815 SLC25A34Q6PIV7 304 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 Q6ZUT4 128 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 SEC11AP67812 179 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 C14orf144Q96I85 54 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 CHAC1Q9BUX1 264 aa10.19□□□□□ -0.78
HIF3A-206ENST00000472815 COX8AP10176 69 aa10.18□□□□□ -0.78
HIF3A-206ENST00000472815 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
HIF3A-206ENST00000472815 B9D2Q9BPU9 175 aa10.18□□□□□ -0.78
HIF3A-206ENST00000472815 A0A096LPF7 62 aa10.17□□□□□ -0.78
HIF3A-206ENST00000472815 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
HIF3A-206ENST00000472815 NMUP48645 174 aa10.17□□□□□ -0.78
HIF3A-206ENST00000472815 ANKRD39Q53RE8 183 aa10.17□□□□□ -0.78
HIF3A-206ENST00000472815 TMEM170BQ5T4T1 132 aa10.17□□□□□ -0.78
HIF3A-206ENST00000472815 DEFB131BA0A096LNP1 70 aa10.16□□□□□ -0.78
HIF3A-206ENST00000472815 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
HIF3A-206ENST00000472815 NANOS2P60321 138 aaKnown RBP10.16□□□□□ -0.78
HIF3A-206ENST00000472815 GAGE6Q13070 117 aa10.16□□□□□ -0.78
HIF3A-206ENST00000472815 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
HIF3A-206ENST00000472815 TINCRA0A1B0GVN0 87 aa10.16□□□□□ -0.78
HIF3A-206ENST00000472815 GEMIN7Q9H840 131 aaKnown RBP10.16□□□□□ -0.78
HIF3A-206ENST00000472815 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
HIF3A-206ENST00000472815 TRAV10A0A0B4J240 114 aa10.15□□□□□ -0.78
HIF3A-206ENST00000472815 A0A1B0GUV1 79 aa10.15□□□□□ -0.78
HIF3A-206ENST00000472815 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
HIF3A-206ENST00000472815 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
HIF3A-206ENST00000472815 FAM104AQ969W3 186 aa10.15□□□□□ -0.78
HIF3A-206ENST00000472815 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
HIF3A-206ENST00000472815 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
HIF3A-206ENST00000472815 E9PLD3 99 aa10.14□□□□□ -0.79
HIF3A-206ENST00000472815 DLEU1O43261 78 aa10.14□□□□□ -0.79
HIF3A-206ENST00000472815 TIRAPP58753 221 aa10.14□□□□□ -0.79
HIF3A-206ENST00000472815 LELP1Q5T871 98 aa10.14□□□□□ -0.79
HIF3A-206ENST00000472815 UBE2D1P51668 147 aa10.13□□□□□ -0.79
HIF3A-206ENST00000472815 HERVK_113P63121 156 aa10.13□□□□□ -0.79
HIF3A-206ENST00000472815 H3BRM9 83 aa10.13□□□□□ -0.79
HIF3A-206ENST00000472815 NHLRC4P0CG21 123 aaPredicted RBP10.13□□□□□ -0.79
HIF3A-206ENST00000472815 BOD1L2Q8IYS8 172 aa10.13□□□□□ -0.79
HIF3A-206ENST00000472815 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
HIF3A-206ENST00000472815 TCTAP57738 103 aa10.12□□□□□ -0.79
HIF3A-206ENST00000472815 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
HIF3A-206ENST00000472815 MRPS16Q9Y3D3 137 aaKnown RBP10.12□□□□□ -0.79
HIF3A-206ENST00000472815 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
HIF3A-206ENST00000472815 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
HIF3A-206ENST00000472815 PRKDCP78527 4128 aaKnown RBP10.11□□□□□ -0.79
HIF3A-206ENST00000472815 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 SIVA1O15304 175 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 LINC00469Q8N7U9 141 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 TENM3Q9P273 2699 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 IGKV2D-26A0A0A0MRZ7 120 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 RBX1P62877 108 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 LYPD5Q6UWN5 251 aa10.1□□□□□ -0.79
HIF3A-206ENST00000472815 CCL25O15444 150 aa10.09□□□□□ -0.79
HIF3A-206ENST00000472815 MPV17L2Q567V2 206 aa10.09□□□□□ -0.79
HIF3A-206ENST00000472815 PCP2Q8IVA1 136 aa10.09□□□□□ -0.79
HIF3A-206ENST00000472815 PLEKHB2Q96CS7 222 aa10.09□□□□□ -0.79
HIF3A-206ENST00000472815 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
HIF3A-206ENST00000472815 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
HIF3A-206ENST00000472815 LEPROTO15243 131 aa10.07□□□□□ -0.8
HIF3A-206ENST00000472815 LGALS3P17931 250 aaKnown RBP10.07□□□□□ -0.8
HIF3A-206ENST00000472815 CTAG1AP78358 180 aa10.07□□□□□ -0.8
HIF3A-206ENST00000472815 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
HIF3A-206ENST00000472815 COL7A1Q02388 2944 aa10.07□□□□□ -0.8
HIF3A-206ENST00000472815 M0R143 59 aa10.07□□□□□ -0.8
HIF3A-206ENST00000472815 SS18Q15532 418 aa10.07□□□□□ -0.8
HIF3A-206ENST00000472815 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
HIF3A-206ENST00000472815 J3QQQ9 107 aa10.06□□□□□ -0.8
HIF3A-206ENST00000472815 DNAH9Q9NYC9 4486 aa10.06□□□□□ -0.8
HIF3A-206ENST00000472815 IGHV1-58A0A0C4DH39 117 aa10.05□□□□□ -0.8
HIF3A-206ENST00000472815 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
HIF3A-206ENST00000472815 ANGP03950 147 aaKnown RBP10.05□□□□□ -0.8
HIF3A-206ENST00000472815 HIGD1BQ9P298 99 aa10.05□□□□□ -0.8
HIF3A-206ENST00000472815 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
HIF3A-206ENST00000472815 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
HIF3A-206ENST00000472815 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
HIF3A-206ENST00000472815 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
HIF3A-206ENST00000472815 IGHV3-30-3P0DP02 117 aa10.03□□□□□ -0.8
HIF3A-206ENST00000472815 SCGB1D4Q6XE38 83 aa10.03□□□□□ -0.8
HIF3A-206ENST00000472815 C2orf91Q6ZV80 131 aa10.03□□□□□ -0.8
HIF3A-206ENST00000472815 SPINK8P0C7L1 97 aa10.02□□□□□ -0.8
HIF3A-206ENST00000472815 COX6A2Q02221 97 aa10.02□□□□□ -0.8
HIF3A-206ENST00000472815 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.8
HIF3A-206ENST00000472815 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms