RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 TIRAPP58753 221 aa7.28□□□□□ -1.24
SMARCD3-208ENST00000472789 KRTDAPP60985 99 aa7.28□□□□□ -1.24
SMARCD3-208ENST00000472789 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
SMARCD3-208ENST00000472789 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
SMARCD3-208ENST00000472789 TIMM21Q9BVV7 248 aa7.28□□□□□ -1.24
SMARCD3-208ENST00000472789 A0A096LNJ9 63 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 TRAV8-6A0A0B4J262 113 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 ZNF25P17030 456 aaPredicted RBP7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 LYPD5Q6UWN5 251 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 PET117Q6UWS5 81 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 DEFB104AQ8WTQ1 72 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 CHCHD5Q9BSY4 110 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 CSDC2Q9Y534 153 aaKnown RBP7.27□□□□□ -1.25
SMARCD3-208ENST00000472789 SYS1-DBNDD2H3BUS1 97 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 SCGB1D1O95968 90 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 LELP1Q5T871 98 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 NTM-AS1Q6ZSK4 140 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 SPATA12Q7Z6I5 190 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 VCX2Q9H322 139 aa7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 MRPS16Q9Y3D3 137 aaKnown RBP7.26□□□□□ -1.25
SMARCD3-208ENST00000472789 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 IGIPA6NJ69 53 aa7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 TMEM262E9PQX1 116 aa7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 RPL39P62891 51 aaKnown RBP7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 MRPL52Q86TS9 123 aaKnown RBP7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 OR5A1Q8NGJ0 315 aa7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 Q9H8V8 135 aa7.25□□□□□ -1.25
SMARCD3-208ENST00000472789 A0A087WX48 190 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 TRAV12-1A0A0B4J245 112 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 H0Y8G0 127 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 FGF6P10767 208 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 MRPS36P82909 103 aaKnown RBP7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 PMVKQ15126 192 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 TEX43Q6ZNM6 134 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 UBE2D4Q9Y2X8 147 aa7.24□□□□□ -1.25
SMARCD3-208ENST00000472789 A0A1B0GUV1 79 aa7.23□□□□□ -1.25
SMARCD3-208ENST00000472789 SIVA1O15304 175 aa7.23□□□□□ -1.25
SMARCD3-208ENST00000472789 SMIM6P0DI80 62 aa7.23□□□□□ -1.25
SMARCD3-208ENST00000472789 UPK3BQ9BT76 320 aa7.23□□□□□ -1.25
SMARCD3-208ENST00000472789 PKHD1P08F94 4074 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 NBDYA0A0U1RRE5 68 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 SEC11AP67812 179 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 S100A12P80511 92 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 GAGE6Q13070 117 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 ZNF664Q8N3J9 261 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 BAALCQ8WXS3 180 aa7.22□□□□□ -1.25
SMARCD3-208ENST00000472789 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
SMARCD3-208ENST00000472789 PLNP26678 52 aa7.21□□□□□ -1.26
SMARCD3-208ENST00000472789 TTC32Q5I0X7 151 aa7.21□□□□□ -1.26
SMARCD3-208ENST00000472789 LINC01545Q5VT33 79 aa7.21□□□□□ -1.26
SMARCD3-208ENST00000472789 WFDC10BQ8IUB3 73 aa7.21□□□□□ -1.26
SMARCD3-208ENST00000472789 CHTOPQ9Y3Y2 248 aaKnown RBP7.21□□□□□ -1.26
SMARCD3-208ENST00000472789 PRSS29PA6NIE9 313 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 F8VRH5 84 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 AMELXQ99217 191 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 CDC42SE2Q9NRR3 84 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 DNAH2Q9P225 4427 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 FAT2Q9NYQ8 4349 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 ABCA13Q86UQ4 5058 aa7.2□□□□□ -1.26
SMARCD3-208ENST00000472789 CCL25O15444 150 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 DPM2O94777 84 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 ODF1Q14990 250 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 PYY3Q5JQD4 70 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 Q6ZR54 194 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 DNAH6Q9C0G6 4158 aa7.19□□□□□ -1.26
SMARCD3-208ENST00000472789 TRAV9-2A0A087WT02 112 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 IGKCP01834 107 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 RBX1P62877 108 aa7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 OPRPNQ99935 248 aaPredicted RBP7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 DYNC1H1Q14204 4646 aaKnown RBP7.18□□□□□ -1.26
SMARCD3-208ENST00000472789 DNAH17Q9UFH2 4485 aa7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 K7EP13 123 aa7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 ANGP03950 147 aaKnown RBP7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 MPV17L2Q567V2 206 aa7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 Q6ZUT4 128 aa7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 KRTAP1-5Q9BYS1 174 aa7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 GEMIN7Q9H840 131 aaKnown RBP7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 MRPL35Q9NZE8 188 aaKnown RBP7.17□□□□□ -1.26
SMARCD3-208ENST00000472789 DNAH10OSP0CZ25 163 aa7.16□□□□□ -1.26
SMARCD3-208ENST00000472789 HERVK_113P63121 156 aa7.16□□□□□ -1.26
SMARCD3-208ENST00000472789 SS18Q15532 418 aa7.16□□□□□ -1.26
SMARCD3-208ENST00000472789 C6orf223Q8N319 242 aa7.16□□□□□ -1.26
SMARCD3-208ENST00000472789 VAMP8Q9BV40 100 aa7.16□□□□□ -1.26
SMARCD3-208ENST00000472789 IGLV4-60A0A075B6I1 120 aa7.15□□□□□ -1.26
SMARCD3-208ENST00000472789 TRAV13-1A0A0B4J241 112 aa7.15□□□□□ -1.26
SMARCD3-208ENST00000472789 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms