RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 TRAV9-1A0A075B6T8 112 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 A0A087WX48 190 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 IGHV1-24A0A0C4DH33 117 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 TRBV6-5A0A0K0K1A5 114 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 I3L3M4 83 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 TNFRSF6BO95407 300 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 PMCHP20382 165 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 POLR2KP53803 58 aaKnown RBP4.5□□□□□ -1.69
SCN9A-206ENST00000472119 COTL1Q14019 142 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 IQCJQ1A5X6 159 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 TMEM97Q5BJF2 176 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 TMEM136Q6ZRR5 245 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 C6orf223Q8N319 242 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 TMEM70Q9BUB7 260 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 DNAH10Q8IVF4 4471 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
SCN9A-206ENST00000472119 TGIF2-C20orf24A0A0A6YYL0 155 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 VCYO14598 125 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 PPP1R17O96001 155 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 TSHBP01222 138 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 NPYP01303 97 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 AMTP48728 403 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 MPV17L2Q567V2 206 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 ORMDL3Q8N138 153 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 C10orf126Q8N4M7 172 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 Q8N976 141 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 TMEM243Q9BU79 118 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 Q9HAA7 133 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 KLK12Q9UKR0 248 aa4.49□□□□□ -1.69
SCN9A-206ENST00000472119 TRBV24-1A0A075B6N3 115 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.48□□□□□ -1.69
SCN9A-206ENST00000472119 TRBV27A0A0K0K1C4 114 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 LOC389332A0A1B0GUA5 103 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 IGKV2-29A2NJV5 120 aaPredicted RBP4.48□□□□□ -1.69
SCN9A-206ENST00000472119 IBA57-AS1B1ANH7 110 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 K7EP13 123 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 UBE2L6O14933 153 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 APCSP02743 223 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 PPBPP02775 128 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 RBX1P62877 108 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 ELOBQ15370 118 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 C20orf78Q9BR46 151 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 CHCHD7Q9BUK0 85 aa4.48□□□□□ -1.69
SCN9A-206ENST00000472119 IGLV4-60A0A075B6I1 120 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 HLA-DQA1P01909 254 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 ANGP03950 147 aaKnown RBP4.47□□□□□ -1.69
SCN9A-206ENST00000472119 FCER1GP30273 86 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 KRTAP10-8P60410 259 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 PKIAP61925 76 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 C14orf177Q52M58 125 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 Q6ZRN7 208 aaPredicted RBP4.47□□□□□ -1.69
SCN9A-206ENST00000472119 CBLN2Q8IUK8 224 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 UBE2WQ96B02 151 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 GNB1LQ9BYB4 327 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 FRAS1Q86XX4 4008 aa4.47□□□□□ -1.69
SCN9A-206ENST00000472119 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 FAT2Q9NYQ8 4349 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 PHOX2AO14813 284 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 TCAPO15273 167 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 FGF6P10767 208 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 ESDP10768 282 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
SCN9A-206ENST00000472119 FABP9Q0Z7S8 132 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 COX19Q49B96 90 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 AMMECR1LQ6DCA0 310 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 RNASEKQ6P5S7 137 aaKnown RBP4.46□□□□□ -1.7
SCN9A-206ENST00000472119 CLPSL2Q6UWE3 100 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 LINC00336Q6ZUF6 198 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 NFE4Q86UQ8 179 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 LINC00269Q8N2A0 174 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 C20orf203Q8NBC4 194 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 KIR2DL4Q99706 377 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 SMIM2Q9BVW6 85 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 SMCO4Q9NRQ5 59 aa4.46□□□□□ -1.7
SCN9A-206ENST00000472119 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 TRAV8-3A0A0A6YYJ7 113 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 CRPP02741 224 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 MT-ND6P03923 174 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 BTF3P20290 206 aaKnown RBP4.45□□□□□ -1.7
SCN9A-206ENST00000472119 LAGE3Q14657 143 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 YPEL4Q96NS1 127 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 LAMTOR2Q9Y2Q5 125 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
SCN9A-206ENST00000472119 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 IGKV3OR2-268A0A0C4DH90 116 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 H7C423 109 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 PSCAO43653 123 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 SCO1O75880 301 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 RAB5AP20339 215 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 IFI27P40305 119 aaPredicted RBP4.44□□□□□ -1.7
SCN9A-206ENST00000472119 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
SCN9A-206ENST00000472119 REG3AQ06141 175 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 Q0VG73 95 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 MAPKAPK5-AS1Q8N8E1 139 aa4.44□□□□□ -1.7
SCN9A-206ENST00000472119 Q8N8P6 123 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms