RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 RPSAP08865 295 aaKnown RBP1.51□□□□□ -2.17
VPS13A-210ENST00000471439 MGST1P10620 155 aaKnown RBP1.51□□□□□ -2.17
VPS13A-210ENST00000471439 NFYAP23511 347 aaPredicted RBP1.51□□□□□ -2.17
VPS13A-210ENST00000471439 G6PCP35575 357 aa1.51□□□□□ -2.17
VPS13A-210ENST00000471439 GABARAPL2P60520 117 aa1.51□□□□□ -2.17
VPS13A-210ENST00000471439 OR8J3Q8NGG0 315 aa1.51□□□□□ -2.17
VPS13A-210ENST00000471439 DYNC2LI1Q8TCX1 351 aa1.51□□□□□ -2.17
VPS13A-210ENST00000471439 RAB2BQ8WUD1 216 aa1.51□□□□□ -2.17
VPS13A-210ENST00000471439 NIPSNAP1Q9BPW8 284 aa1.51□□□□□ -2.17
VPS13A-210ENST00000471439 CMSS1Q9BQ75 279 aaKnown RBP1.51□□□□□ -2.17
VPS13A-210ENST00000471439 ERICH4A6NGS2 130 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 SLC17A3O00476 420 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 GPX1P07203 203 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 RCVRNP35243 200 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 HSPE1P61604 102 aaKnown RBP1.5□□□□□ -2.17
VPS13A-210ENST00000471439 PPP3R1P63098 170 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 OR2T35Q8NGX2 323 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 DTD1Q8TEA8 209 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 ACY3Q96HD9 319 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 COMMD9Q9P000 198 aa1.5□□□□□ -2.17
VPS13A-210ENST00000471439 TRBV6-8A0A0A6YYG3 113 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 OR4E1P0C645 316 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 SLC25A4P12235 298 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 TMED1Q13445 227 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 MNS1Q8NEH6 495 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 OR13C8Q8NGS7 320 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 OR5AK2Q8NH90 309 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 IMUPQ9GZP8 106 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 NPVFQ9HCQ7 196 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 SSR3Q9UNL2 185 aa1.49□□□□□ -2.17
VPS13A-210ENST00000471439 FAM236DA0A1B0GTK5 79 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 PNMA8CA0A1B0GUJ8 204 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 C19orf71A6NCJ1 209 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 HSBP1L1C9JCN9 74 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 M0R129 80 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 BIRC5O15392 142 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 NUPR1O60356 82 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 SHBGP04278 402 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 CD2P06729 351 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 FAM236CP0DP71 79 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 GADD45AP24522 165 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 OR51H1Q8NH63 302 aa1.48□□□□□ -2.17
VPS13A-210ENST00000471439 TRBV20-1A0A075B6N2 111 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 FXYD6-FXYD2A0A087WZ82 144 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 A0A0A6YYH2 397 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 A6NJ64 397 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 TMEM212A6NML5 194 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 SNRPGP15A8MWD9 76 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 J3QLW9 94 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 GNRH2O43555 120 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 APOMO95445 188 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 LPAR6P43657 344 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 LINC00313P59037 77 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 CATR1Q13166 79 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 Q6ZS49 121 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 GID4Q8IVV7 300 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 TSC22D3Q99576 134 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 CMTM6Q9NX76 183 aa1.47□□□□□ -2.17
VPS13A-210ENST00000471439 PVALBP20472 110 aaPredicted RBP1.46□□□□□ -2.18
VPS13A-210ENST00000471439 PKIAP61925 76 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
VPS13A-210ENST00000471439 C4orf26Q17RF5 130 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 KRTAP19-8Q3LI54 63 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 HSD17B12Q53GQ0 312 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 HACD4Q5VWC8 232 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 LHFPL1Q86WI0 220 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 NUP35Q8NFH5 326 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 LPAR5Q9H1C0 372 aa1.46□□□□□ -2.18
VPS13A-210ENST00000471439 BCE1O60756 84 aa1.45□□□□□ -2.18
VPS13A-210ENST00000471439 UBE2D2P62837 147 aa1.45□□□□□ -2.18
VPS13A-210ENST00000471439 MRPL51Q4U2R6 128 aaKnown RBP1.45□□□□□ -2.18
VPS13A-210ENST00000471439 EXOC3-AS1Q8N2X6 119 aa1.45□□□□□ -2.18
VPS13A-210ENST00000471439 AGPAT4-IT1Q9H0P7 198 aa1.45□□□□□ -2.18
VPS13A-210ENST00000471439 ARL6IP5O75915 188 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 CST7O76096 145 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 ARL14EPLP0DKL9 152 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 RPL7P18124 248 aaKnown RBP1.44□□□□□ -2.18
VPS13A-210ENST00000471439 DAPP51397 102 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 PIGPP57054 158 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 SURF2Q15527 256 aaPredicted RBP1.44□□□□□ -2.18
VPS13A-210ENST00000471439 ZNF818PQ6ZRF7 136 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 ATP6V1G3Q96LB4 118 aa1.44□□□□□ -2.18
VPS13A-210ENST00000471439 IGKV3OR2-268A0A0C4DH90 116 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 DAPL1A0PJW8 107 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 FNDC10F2Z333 226 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 H3BRN7 92 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 MRASO14807 208 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 IGKV1-5P01602 117 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 NMBP08949 121 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 UBBP0CG47 229 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 ESDP10768 282 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 GTF2A1P52655 376 aaPredicted RBP1.43□□□□□ -2.18
VPS13A-210ENST00000471439 TSPEAR-AS2P59090 65 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 MSMO1Q15800 293 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 RASL11AQ6T310 242 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 LCN15Q6UWW0 184 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 GNB1LQ9BYB4 327 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 SMDT1Q9H4I9 107 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 C11orf1Q9H5F2 150 aa1.43□□□□□ -2.18
VPS13A-210ENST00000471439 CKLFQ9UBR5 152 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms