RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 A0A087WTM6 91 aa8.26□□□□□ -1.09
SCNM1-205ENST00000471039 IGKV2-29A2NJV5 120 aaPredicted RBP8.26□□□□□ -1.09
SCNM1-205ENST00000471039 TNFRSF6BO95407 300 aa8.26□□□□□ -1.09
SCNM1-205ENST00000471039 NPYP01303 97 aa8.26□□□□□ -1.09
SCNM1-205ENST00000471039 ENHOQ6UWT2 76 aa8.26□□□□□ -1.09
SCNM1-205ENST00000471039 C20orf203Q8NBC4 194 aa8.26□□□□□ -1.09
SCNM1-205ENST00000471039 PRR34Q9NV39 138 aa8.26□□□□□ -1.09
SCNM1-205ENST00000471039 IGKV2D-24A0A075B6R9 120 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 A0A1B0GUV1 79 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 LRCOL1A6NCL2 159 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 PPBPP02775 128 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 LINC00310P59036 64 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 SPATA12Q7Z6I5 190 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 ORMDL3Q8N138 153 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 RMI2Q96E14 147 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 C20orf78Q9BR46 151 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 SMIM2Q9BVW6 85 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 TM2D2Q9BX73 214 aa8.25□□□□□ -1.09
SCNM1-205ENST00000471039 H7C423 109 aa8.24□□□□□ -1.09
SCNM1-205ENST00000471039 VCYO14598 125 aa8.24□□□□□ -1.09
SCNM1-205ENST00000471039 NUPR1O60356 82 aa8.24□□□□□ -1.09
SCNM1-205ENST00000471039 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
SCNM1-205ENST00000471039 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
SCNM1-205ENST00000471039 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
SCNM1-205ENST00000471039 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
SCNM1-205ENST00000471039 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
SCNM1-205ENST00000471039 EREGO14944 169 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 HSBP1O75506 76 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 FGF6P10767 208 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 FCER1GP30273 86 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 REG3AQ06141 175 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 WFDC2Q14508 124 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
SCNM1-205ENST00000471039 MIAQ16674 131 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 PYY3Q5JQD4 70 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 KIR2DL4Q99706 377 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 LAMTOR2Q9Y2Q5 125 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 COX11Q9Y6N1 276 aa8.23□□□□□ -1.09
SCNM1-205ENST00000471039 C16orf90A8MZG2 172 aa8.22□□□□□ -1.09
SCNM1-205ENST00000471039 ZNF25P17030 456 aaPredicted RBP8.22□□□□□ -1.09
SCNM1-205ENST00000471039 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
SCNM1-205ENST00000471039 MAPKAPK5-AS1Q8N8E1 139 aa8.22□□□□□ -1.09
SCNM1-205ENST00000471039 LINC00614P0C842 121 aa8.21□□□□□ -1.1
SCNM1-205ENST00000471039 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.1
SCNM1-205ENST00000471039 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.1
SCNM1-205ENST00000471039 LECT2O14960 151 aa8.2□□□□□ -1.1
SCNM1-205ENST00000471039 TCAPO15273 167 aa8.2□□□□□ -1.1
SCNM1-205ENST00000471039 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCNM1-205ENST00000471039 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
SCNM1-205ENST00000471039 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
SCNM1-205ENST00000471039 MRPL52Q86TS9 123 aaKnown RBP8.2□□□□□ -1.1
SCNM1-205ENST00000471039 Q8N814 137 aa8.2□□□□□ -1.1
SCNM1-205ENST00000471039 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
SCNM1-205ENST00000471039 IGLV10-54A0A075B6I4 117 aa8.19□□□□□ -1.1
SCNM1-205ENST00000471039 S100A12P80511 92 aa8.19□□□□□ -1.1
SCNM1-205ENST00000471039 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
SCNM1-205ENST00000471039 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
SCNM1-205ENST00000471039 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
SCNM1-205ENST00000471039 TRAV8-4A0A0B4J246 113 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 PRSS47A8MTI9 375 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 OR5A1Q8NGJ0 315 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 TMEM101Q96IK0 257 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 AP5S1Q9NUS5 200 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 UBE2D4Q9Y2X8 147 aa8.18□□□□□ -1.1
SCNM1-205ENST00000471039 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
SCNM1-205ENST00000471039 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
SCNM1-205ENST00000471039 SCGB1D1O95968 90 aa8.17□□□□□ -1.1
SCNM1-205ENST00000471039 NTN5Q8WTR8 489 aaPredicted RBP8.17□□□□□ -1.1
SCNM1-205ENST00000471039 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
SCNM1-205ENST00000471039 LOC389332A0A1B0GUA5 103 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 RPL39P62891 51 aaKnown RBP8.16□□□□□ -1.1
SCNM1-205ENST00000471039 SMAGPQ0VAQ4 97 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 Q6ZUT4 128 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 FAM19A2Q8N3H0 131 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 Q8N8P6 123 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 NXT2Q9NPJ8 142 aaKnown RBP8.16□□□□□ -1.1
SCNM1-205ENST00000471039 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 PGPEP1Q9NXJ5 209 aa8.16□□□□□ -1.1
SCNM1-205ENST00000471039 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
SCNM1-205ENST00000471039 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.15□□□□□ -1.1
SCNM1-205ENST00000471039 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
SCNM1-205ENST00000471039 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
SCNM1-205ENST00000471039 KRTDAPP60985 99 aa8.15□□□□□ -1.1
SCNM1-205ENST00000471039 TIMM21Q9BVV7 248 aa8.15□□□□□ -1.1
SCNM1-205ENST00000471039 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
SCNM1-205ENST00000471039 LINC01546A6NGU7 62 aa8.14□□□□□ -1.11
SCNM1-205ENST00000471039 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
SCNM1-205ENST00000471039 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
SCNM1-205ENST00000471039 RNASE13Q5GAN3 156 aaKnown RBP8.14□□□□□ -1.11
SCNM1-205ENST00000471039 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
SCNM1-205ENST00000471039 ZNF664Q8N3J9 261 aa8.14□□□□□ -1.11
SCNM1-205ENST00000471039 SPANXA1Q9NS26 97 aa8.14□□□□□ -1.11
SCNM1-205ENST00000471039 HSPG2P98160 4391 aa8.14□□□□□ -1.11
SCNM1-205ENST00000471039 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
SCNM1-205ENST00000471039 C3orf79P0CE67 100 aa8.13□□□□□ -1.11
SCNM1-205ENST00000471039 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
SCNM1-205ENST00000471039 CHCHD10Q8WYQ3 142 aaPredicted RBP8.13□□□□□ -1.11
SCNM1-205ENST00000471039 RYR1P21817 5038 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms