RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 HLA-DRB4P13762 266 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 CRHBPP24387 322 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 S100A4P26447 101 aaKnown RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 GTF2A1P52655 376 aaPredicted RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 TSPEAR-AS2P59090 65 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 TAS2R30P59541 319 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 TAS2R20P59543 309 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 CDC42P60953 191 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 PSG9Q00887 426 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 RPL18Q07020 188 aaKnown RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 SCGB2B2Q4G0G5 96 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 RPL22L1Q6P5R6 122 aaKnown RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 KTN1-AS1Q86SY8 53 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 IFT20Q8IY31 132 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 C12orf45Q8N5I9 185 aaPredicted RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 OR5A2Q8NGI9 324 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 TMEM167AQ8TBQ9 72 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 DNAJC9Q8WXX5 260 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 PLEKHB2Q96CS7 222 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 MRPS24Q96EL2 167 aaKnown RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 PFDN5Q99471 154 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 MIEN1Q9BRT3 115 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 NKX6-2Q9C056 277 aaPredicted RBP0.86□□□□□ -2.27
ITGA6-209ENST00000470259 C20orf27Q9GZN8 174 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 C11orf1Q9H5F2 150 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 SPANXA1Q9NS26 97 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 SLC39A9Q9NUM3 307 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 LINC00474Q9P2X8 69 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 PRO0255Q9UI72 69 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 OR52A1Q9UKL2 312 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 PCTPQ9UKL6 214 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 HHLA3Q9XRX5 114 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 HLA-DRB4X5D2U9 266 aa0.86□□□□□ -2.27
ITGA6-209ENST00000470259 IGKV1D-37A0A075B6S9 117 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 A0A1B0GU33 70 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 A0A1B0GW54 56 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 DUXBA0A1W2PPF3 345 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 DHRS12A0PJE2 317 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 GRIFINA4D1Z8 144 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 C19orf71A6NCJ1 209 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 LEPROTO15243 131 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 FAM107AO95990 144 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 NAPSAO96009 420 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 COX4I1P13073 169 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 RPL7P18124 248 aaKnown RBP0.85□□□□□ -2.27
ITGA6-209ENST00000470259 ETV6P41212 452 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 LPAR6P43657 344 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 EIF2B2P49770 351 aaKnown RBP0.85□□□□□ -2.27
ITGA6-209ENST00000470259 ZNF137PP52743 207 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 CKS1BP61024 79 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 UBE2D3P61077 147 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 HIST1H4AP62805 103 aaKnown RBP0.85□□□□□ -2.27
ITGA6-209ENST00000470259 CCL20P78556 96 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 SPANXN3Q5MJ09 141 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 Q5VV11 94 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 EIF5AL1Q6IS14 154 aaKnown RBP0.85□□□□□ -2.27
ITGA6-209ENST00000470259 HRCT1Q6UXD1 115 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 C2orf91Q6ZV80 131 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 LCA10Q71F78 164 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 BPIFA4PQ86YQ2 179 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 CLVS1Q8IUQ0 354 aaPredicted RBP0.85□□□□□ -2.27
ITGA6-209ENST00000470259 OR8J3Q8NGG0 315 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 OR4D11Q8NGI4 311 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 OR10D4PQ8NGN7 298 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 OR5C1Q8NGR4 320 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 THEM6Q8WUY1 208 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 BORCS8Q96FH0 119 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 VPS25Q9BRG1 176 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 DERL1Q9BUN8 251 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 COPZ2Q9P299 210 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 CKLFQ9UBR5 152 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 JPT1Q9UK76 154 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 TRAPPC2LQ9UL33 140 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 PAIP2BQ9ULR5 123 aaKnown RBP0.85□□□□□ -2.27
ITGA6-209ENST00000470259 LHFPL6Q9Y693 200 aa0.85□□□□□ -2.27
ITGA6-209ENST00000470259 IGHV3-73A0A0B4J1V6 119 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 TRDV1A0A1B0GX56 115 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 IRGMA1A4Y4 181 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 EFCAB10A6NFE3 127 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 FABP5P3A8MUU1 101 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 H3BT86 120 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 GABARAPH6UMI1 98 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 TMEM256-PLSCR3K7ERE1 68 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 TAX1BP3O14907 124 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 DEGS1O15121 323 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 GADD45GO95257 159 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 OR2H2O95918 312 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 NPYP01303 97 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 TRGC2P03986 189 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 BPGMP07738 259 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 HIST1H1BP16401 226 aaKnown RBP0.84□□□□□ -2.27
ITGA6-209ENST00000470259 S100A11P31949 105 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 AKR1C3P42330 323 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 ZNF80P51504 273 aaPredicted RBP0.84□□□□□ -2.27
ITGA6-209ENST00000470259 RBM11P57052 281 aaKnown RBP0.84□□□□□ -2.27
ITGA6-209ENST00000470259 YPEL3P61236 119 aaPredicted RBP0.84□□□□□ -2.27
ITGA6-209ENST00000470259 UBE2BP63146 152 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 AKR1C1Q04828 323 aa0.84□□□□□ -2.27
ITGA6-209ENST00000470259 FAM229BQ4G0N7 80 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms