RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 PIK3CD-AS1Q5SR53 167 aa6.96□□□□□ -1.3
NHLRC3-203ENST00000470258 BRD3OSQ6XYD6 125 aa6.96□□□□□ -1.3
NHLRC3-203ENST00000470258 LINC00467Q9BRT7 94 aa6.96□□□□□ -1.3
NHLRC3-203ENST00000470258 SIRPDQ9H106 197 aa6.96□□□□□ -1.3
NHLRC3-203ENST00000470258 PRORYQ9H606 182 aa6.96□□□□□ -1.3
NHLRC3-203ENST00000470258 CSPG4Q6UVK1 2322 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 K7ENP7 123 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 SOSTDC1Q6X4U4 206 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 DPH3Q96FX2 82 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 IGHG2P01859 326 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 SPG11Q96JI7 2443 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 NDUFA1O15239 70 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 MALP21145 153 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 PKD1L2Q7Z442 2459 aa6.95□□□□□ -1.3
NHLRC3-203ENST00000470258 COX6A2Q02221 97 aa6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 UBE2D4Q9Y2X8 147 aa6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 MOB4Q9Y3A3 225 aa6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 F5H768 121 aa6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 TIMM17BO60830 172 aa6.94□□□□□ -1.3
NHLRC3-203ENST00000470258 OXTP01178 125 aa6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 TMEM258P61165 79 aa6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 C10orf105Q8TEF2 133 aa6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 C9orf129Q5T035 196 aaKnown RBP6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 C22orf24Q9Y442 160 aa6.93□□□□□ -1.3
NHLRC3-203ENST00000470258 CUBNO60494 3623 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 USP17L23D6RBM5 183 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 CCL21O00585 134 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 SNRPD3P62318 126 aaKnown RBP6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 Q6ZSN1 163 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 Q8NA96 180 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 LINC00846Q9NV44 126 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 CRPP02741 224 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 BEAN1Q3B7T3 259 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 CHCHD7Q9BUK0 85 aa6.92□□□□□ -1.3
NHLRC3-203ENST00000470258 KLK9Q2XQG4 91 aa6.91□□□□□ -1.3
NHLRC3-203ENST00000470258 NCR3O14931 201 aa6.91□□□□□ -1.3
NHLRC3-203ENST00000470258 BLCAPP62952 87 aa6.91□□□□□ -1.3
NHLRC3-203ENST00000470258 WFDC9Q8NEX5 89 aa6.91□□□□□ -1.3
NHLRC3-203ENST00000470258 A0A087WYN8 130 aa6.9□□□□□ -1.3
NHLRC3-203ENST00000470258 COPS9Q8WXC6 57 aa6.9□□□□□ -1.3
NHLRC3-203ENST00000470258 SLPIP03973 132 aa6.9□□□□□ -1.31
NHLRC3-203ENST00000470258 USMG5Q96IX5 58 aa6.9□□□□□ -1.31
NHLRC3-203ENST00000470258 TOMM7Q9P0U1 55 aa6.9□□□□□ -1.31
NHLRC3-203ENST00000470258 HIST2H2BCQ6DN03 193 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 HIST2H2BDQ6DRA6 164 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 HILS1P60008 231 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 CDSNQ15517 529 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 LINC01561Q8N1V8 128 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 IGSF10Q6WRI0 2623 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 EPG5Q9HCE0 2579 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 BPESC1Q9GZL8 116 aa6.89□□□□□ -1.31
NHLRC3-203ENST00000470258 LECT2O14960 151 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 C19orf54Q5BKX5 351 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 CRYBG3Q68DQ2 2970 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 H3BUX3 64 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 WIPF1O43516 503 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 RBMY1A1P0DJD3 496 aaKnown RBP6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 RBMY1CP0DJD4 496 aa6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
NHLRC3-203ENST00000470258 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 FHL2Q14192 279 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 Q6JHZ5 121 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 UPK3BQ9BT76 320 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 GHRHP01286 108 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 MIR7-3HGQ8N6C7 128 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
NHLRC3-203ENST00000470258 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 LINC00158P58513 81 aa6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 Q5XG85 94 aa6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 SMIM11BQ8TCY0 68 aa6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 WNK1Q9H4A3 2382 aa6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 RPL36AP83881 106 aaKnown RBP6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
NHLRC3-203ENST00000470258 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
NHLRC3-203ENST00000470258 C11orf71Q6IPW1 123 aa6.85□□□□□ -1.31
NHLRC3-203ENST00000470258 C10orf99Q6UWK7 81 aa6.85□□□□□ -1.31
NHLRC3-203ENST00000470258 CFHR3Q02985 330 aa6.85□□□□□ -1.31
NHLRC3-203ENST00000470258 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
NHLRC3-203ENST00000470258 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
NHLRC3-203ENST00000470258 IGHV3-53P01767 116 aa6.84□□□□□ -1.31
NHLRC3-203ENST00000470258 PFN2P35080 140 aa6.84□□□□□ -1.31
NHLRC3-203ENST00000470258 RBMY1BA6NDE4 496 aaKnown RBP6.84□□□□□ -1.32
NHLRC3-203ENST00000470258 RBMY1EA6NEQ0 496 aaKnown RBP6.84□□□□□ -1.32
NHLRC3-203ENST00000470258 K7EQG2 157 aa6.84□□□□□ -1.32
NHLRC3-203ENST00000470258 PAX4O43316 350 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms