RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 C2orf66Q6UXQ4 117 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 ZNF664Q8N3J9 261 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 SPANXA1Q9NS26 97 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 CYSLTR1Q9Y271 337 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 FRAS1Q86XX4 4008 aa7.05□□□□□ -1.28
SMC1A-206ENST00000470241 MIAQ16674 131 aa7.04□□□□□ -1.28
SMC1A-206ENST00000470241 DGAT2L7PQ6IED9 249 aa7.04□□□□□ -1.28
SMC1A-206ENST00000470241 Q6ZUT4 128 aa7.04□□□□□ -1.28
SMC1A-206ENST00000470241 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-206ENST00000470241 AP5S1Q9NUS5 200 aa7.04□□□□□ -1.28
SMC1A-206ENST00000470241 PYGO1Q9Y3Y4 419 aa7.04□□□□□ -1.28
SMC1A-206ENST00000470241 DNAH11Q96DT5 4516 aa7.04□□□□□ -1.28
SMC1A-206ENST00000470241 IGKV2D-24A0A075B6R9 120 aa7.03□□□□□ -1.28
SMC1A-206ENST00000470241 A0A096LNJ9 63 aa7.03□□□□□ -1.28
SMC1A-206ENST00000470241 RAB5BP61020 215 aa7.03□□□□□ -1.28
SMC1A-206ENST00000470241 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
SMC1A-206ENST00000470241 TNP2Q05952 138 aa7.03□□□□□ -1.28
SMC1A-206ENST00000470241 RNASE13Q5GAN3 156 aaKnown RBP7.03□□□□□ -1.28
SMC1A-206ENST00000470241 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
SMC1A-206ENST00000470241 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
SMC1A-206ENST00000470241 IGLV10-54A0A075B6I4 117 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 IGLV4-3A0A075B6K6 122 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 IGKV3OR2-268A0A0C4DH90 116 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 IGIPA6NJ69 53 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 G0S2P27469 103 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 LINC00310P59036 64 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 LINC00336Q6ZUF6 198 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 BAGE3Q86Y29 109 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 MAPKAPK5-AS1Q8N8E1 139 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 RMI2Q96E14 147 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 TM2D2Q9BX73 214 aa7.02□□□□□ -1.29
SMC1A-206ENST00000470241 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 LINC00959A0A1B0GUT2 108 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BCP62807 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 PMCHL1Q16048 86 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST2H2BEQ16778 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BHQ93079 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 CHCHD1Q96BP2 118 aaKnown RBP7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BNQ99877 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 HIST1H2BMQ99879 126 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 COX11Q9Y6N1 276 aa7.01□□□□□ -1.29
SMC1A-206ENST00000470241 PSCAO43653 123 aa7□□□□□ -1.29
SMC1A-206ENST00000470241 SERF1AO75920 110 aa7□□□□□ -1.29
SMC1A-206ENST00000470241 HBDP02042 147 aa7□□□□□ -1.29
SMC1A-206ENST00000470241 NPSP0C0P6 89 aa7□□□□□ -1.29
SMC1A-206ENST00000470241 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
SMC1A-206ENST00000470241 TIMM17AQ99595 171 aa7□□□□□ -1.29
SMC1A-206ENST00000470241 A0A087WTM6 91 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 LRCOL1A6NCL2 159 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 LINC01549A6NIU2 74 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 NUPR1O60356 82 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 WFDC2Q14508 124 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 PDZD11Q5EBL8 140 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 LINC00173Q6ZV60 143 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 ERASQ7Z444 233 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-206ENST00000470241 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 AMELXQ99217 191 aa6.99□□□□□ -1.29
SMC1A-206ENST00000470241 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 A0A1B0GVY2 172 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 CCL25O15444 150 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 HSBP1O75506 76 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 SS18Q15532 418 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 BAALCQ8WXS3 180 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 PKD1P98161 4303 aa6.98□□□□□ -1.29
SMC1A-206ENST00000470241 C1orf196B1AJZ1 125 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 LECT2O14960 151 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 XCL1P47992 114 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 FOXI1Q12951 378 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 Q6ZN92 141 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 FAM19A2Q8N3H0 131 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 VCX2Q9H322 139 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 DYNC1H1Q14204 4646 aaKnown RBP6.97□□□□□ -1.29
SMC1A-206ENST00000470241 DNAH5Q8TE73 4624 aa6.97□□□□□ -1.29
SMC1A-206ENST00000470241 UBE2D1P51668 147 aa6.96□□□□□ -1.3
SMC1A-206ENST00000470241 PAPPA-AS1Q5QFB9 102 aa6.96□□□□□ -1.3
SMC1A-206ENST00000470241 CD164L2Q6UWJ8 174 aa6.96□□□□□ -1.3
SMC1A-206ENST00000470241 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.3
SMC1A-206ENST00000470241 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-206ENST00000470241 COA6Q5JTJ3 125 aaKnown RBP6.95□□□□□ -1.3
SMC1A-206ENST00000470241 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
SMC1A-206ENST00000470241 C2orf88Q9BSF0 95 aa6.95□□□□□ -1.3
SMC1A-206ENST00000470241 USP17L23D6RBM5 183 aa6.94□□□□□ -1.3
SMC1A-206ENST00000470241 ATP5LO75964 103 aa6.94□□□□□ -1.3
SMC1A-206ENST00000470241 PMVKQ15126 192 aa6.94□□□□□ -1.3
SMC1A-206ENST00000470241 Q8N814 137 aa6.94□□□□□ -1.3
SMC1A-206ENST00000470241 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
SMC1A-206ENST00000470241 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms