RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 C9orf84Q5VXU9 1444 aa-1.76□□□□□ -2.69
SHQ1-204ENST00000468347 NCOA3Q9Y6Q9 1424 aa-1.76□□□□□ -2.69
SHQ1-204ENST00000468347 ARHGEF5Q12774 1597 aa-1.76□□□□□ -2.69
SHQ1-204ENST00000468347 CDC42BPAQ5VT25 1732 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 H3BMG7 143 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 APOA1P02647 267 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 PIRTP0C851 137 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 RPL7P18124 248 aaKnown RBP-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 FGF7P21781 194 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 S100A11P31949 105 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 RPS28P62857 69 aaKnown RBP-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 PLGLB1Q02325 96 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 HSD17B12Q53GQ0 312 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 AKAP14Q86UN6 197 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 AP3S1Q92572 193 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 METTL1Q9UBP6 276 aaKnown RBP-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 PRNDQ9UKY0 176 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 UFC1Q9Y3C8 167 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 R4GMQ9 66 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 SYNJ1O43426 1573 aa-1.77□□□□□ -2.69
SHQ1-204ENST00000468347 FREM2Q5SZK8 3169 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 G3V2T6 193 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 H3BQV1 296 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 I3L3M4 83 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 PGRMC1O00264 195 aaKnown RBP-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 OCM2P0CE71 109 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 PIPP12273 146 aaPredicted RBP-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 LSM6P62312 80 aaKnown RBP-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 BAGE2Q86Y30 109 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 Q8N8P6 123 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 C9orf16Q9BUW7 83 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 USE1Q9NZ43 259 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 LSM2Q9Y333 95 aaKnown RBP-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 DNAJC15Q9Y5T4 150 aa-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 XRN1Q8IZH2 1706 aaKnown RBP-1.78□□□□□ -2.69
SHQ1-204ENST00000468347 IGLC7A0M8Q6 106 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 NDUFC2O95298 119 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 PTMAP06454 111 aaKnown RBP-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 PPP1R2P41236 205 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 COX17Q14061 63 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 TMEM97Q5BJF2 176 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 CLLU1Q5K131 121 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 MIC13Q5XKP0 118 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 NCOR1P1Q9H4R4 102 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 RPRMQ9NS64 109 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 CDKN2A-AS1Q9UH64 79 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 TRAPPC2LQ9UL33 140 aa-1.79□□□□□ -2.7
SHQ1-204ENST00000468347 PRG4Q92954 1404 aaPredicted RBP-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 LOC100130705A0A1B0GUX0 176 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 HCG22E2RYF7 251 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 H7C1C5 153 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 J3QLW9 94 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 HSPE1P61604 102 aaKnown RBP-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 CRYBG3Q68DQ2 2970 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 CLPSL2Q6UWE3 100 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 CNPY4Q8N129 248 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 TSLPQ969D9 159 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 TET3O43151 1660 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 RAPGEF6Q8TEU7 1601 aa-1.8□□□□□ -2.7
SHQ1-204ENST00000468347 C1orf167Q5SNV9 1468 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 UQCRQO14949 82 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 DEFB4AO15263 64 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 MT-ND4LP03901 98 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 RRAS2P62070 204 aaPredicted RBP-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 MRPS15P82914 257 aaKnown RBP-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 C10orf128Q5T292 105 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 DCUN1D2Q6PH85 259 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 ATP6V0E2Q8NHE4 81 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 CCDC42Q96M95 316 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 PARVGQ9HBI0 331 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 HIGD1BQ9P298 99 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 A0A0G2JMZ2 1700 aa-1.81□□□□□ -2.7
SHQ1-204ENST00000468347 PLEKHH2Q8IVE3 1493 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 TRBV7-3A0A075B6L6 115 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 TRAV2A0A0B4J234 112 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 PNMA8CA0A1B0GUJ8 204 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 CCDC179H3BU77 68 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 UQCR11O14957 56 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 APOA2P02652 100 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 LIN52Q52LA3 116 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 RPL7L1Q6DKI1 246 aaKnown RBP-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 ZNF818PQ6ZRF7 136 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 CROCCP2Q86T23 111 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 KRTAP8-1Q8IUC2 63 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 SSR3Q9UNL2 185 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 LINC01558Q9Y6Z2 57 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 CAMSAP1Q5T5Y3 1602 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 DMDP11532 3685 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 MYO15AQ9UKN7 3530 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 PXDNQ92626 1479 aa-1.82□□□□□ -2.7
SHQ1-204ENST00000468347 NUP188Q5SRE5 1749 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 ARHGEF10O15013 1369 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 TRBV7-6A0A0J9YX20 115 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 NEFHP12036 1026 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 HIST1H1BP16401 226 aaKnown RBP-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 RPL22P35268 128 aaKnown RBP-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 UBA52P62987 128 aaKnown RBP-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 SEC11AP67812 179 aa-1.83□□□□□ -2.7
SHQ1-204ENST00000468347 PRLHP81277 87 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms