RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 RNF185Q96GF1 192 aa4.72□□□□□ -1.65
CLDN4-204ENST00000466411 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
CLDN4-204ENST00000466411 CHCHD5Q9BSY4 110 aa4.72□□□□□ -1.65
CLDN4-204ENST00000466411 TMEM70Q9BUB7 260 aa4.72□□□□□ -1.65
CLDN4-204ENST00000466411 MAP1LC3AQ9H492 121 aa4.72□□□□□ -1.65
CLDN4-204ENST00000466411 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 A0A1B0GUV1 79 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 PRSS47A8MTI9 375 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 D6R8Y8 96 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 TNFRSF6BO95407 300 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 CRPP02741 224 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 RAB5AP20339 215 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 POLR2KP53803 58 aaKnown RBP4.71□□□□□ -1.66
CLDN4-204ENST00000466411 TMEM136Q6ZRR5 245 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 NIT1Q86X76 327 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 C6orf223Q8N319 242 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 PRELID3AQ96N28 172 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 TM2D2Q9BX73 214 aa4.71□□□□□ -1.66
CLDN4-204ENST00000466411 NXT2Q9NPJ8 142 aaKnown RBP4.71□□□□□ -1.66
CLDN4-204ENST00000466411 IBA57-AS1B1ANH7 110 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 TMEM262E9PQX1 116 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 CCL25O15444 150 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 NPSP0C0P6 89 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 S100A1P23297 94 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 MIAQ16674 131 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 ORMDL2Q53FV1 153 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 WFDC10BQ8IUB3 73 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 NRACQ8N912 160 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 RPL39LQ96EH5 51 aaKnown RBP4.7□□□□□ -1.66
CLDN4-204ENST00000466411 SMIM2Q9BVW6 85 aa4.7□□□□□ -1.66
CLDN4-204ENST00000466411 TRAV8-4A0A0B4J246 113 aa4.69□□□□□ -1.66
CLDN4-204ENST00000466411 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
CLDN4-204ENST00000466411 RAB5BP61020 215 aa4.69□□□□□ -1.66
CLDN4-204ENST00000466411 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
CLDN4-204ENST00000466411 Q5VSD8 79 aa4.69□□□□□ -1.66
CLDN4-204ENST00000466411 MRPL52Q86TS9 123 aaKnown RBP4.69□□□□□ -1.66
CLDN4-204ENST00000466411 CSDC2Q9Y534 153 aaKnown RBP4.69□□□□□ -1.66
CLDN4-204ENST00000466411 LRP2P98164 4655 aa4.69□□□□□ -1.66
CLDN4-204ENST00000466411 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
CLDN4-204ENST00000466411 IGLV2-18A0A075B6J9 118 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 KRTAP29-1A8MX34 341 aaPredicted RBP4.68□□□□□ -1.66
CLDN4-204ENST00000466411 PSCAO43653 123 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 XGP55808 180 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 DGAT2L7PQ6IED9 249 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 Q8N8P6 123 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 TIMM21Q9BVV7 248 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 SPANXA1Q9NS26 97 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 TRAPPC1Q9Y5R8 145 aa4.68□□□□□ -1.66
CLDN4-204ENST00000466411 TSHBP01222 138 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 NPYP01303 97 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 ANGP03950 147 aaKnown RBP4.67□□□□□ -1.66
CLDN4-204ENST00000466411 IFI27P40305 119 aaPredicted RBP4.67□□□□□ -1.66
CLDN4-204ENST00000466411 RPS10P46783 165 aaKnown RBP4.67□□□□□ -1.66
CLDN4-204ENST00000466411 FABP9Q0Z7S8 132 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 C14orf177Q52M58 125 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 ATRAIDQ6UW56 229 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 NTM-AS1Q6ZSK4 140 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 OR5A1Q8NGJ0 315 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 Q9UF83 564 aa4.67□□□□□ -1.66
CLDN4-204ENST00000466411 SMKR1H3BMG3 65 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 IGHV3-30P01768 117 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 IGHV3-33P01772 117 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 IGHV3-30-3P0DP02 117 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 IGHV3-30-5P0DP03 117 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 FGF6P10767 208 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 ESDP10768 282 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 RBX1P62877 108 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 MPV17L2Q567V2 206 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 RNASEKQ6P5S7 137 aaKnown RBP4.66□□□□□ -1.66
CLDN4-204ENST00000466411 C20orf203Q8NBC4 194 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 PRSS3P2Q8NHM4 247 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 CYSLTR1Q9Y271 337 aa4.66□□□□□ -1.66
CLDN4-204ENST00000466411 TGIF2-C20orf24A0A0A6YYL0 155 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 MRPS36P82909 103 aaKnown RBP4.65□□□□□ -1.67
CLDN4-204ENST00000466411 REG3AQ06141 175 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 GAGE6Q13070 117 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 Q6ZN92 141 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 FA2HQ7L5A8 372 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 UBE2WQ96B02 151 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 ALKBH7Q9BT30 221 aaPredicted RBP4.65□□□□□ -1.67
CLDN4-204ENST00000466411 KLK12Q9UKR0 248 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 PYGO1Q9Y3Y4 419 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
CLDN4-204ENST00000466411 LINC01546A6NGU7 62 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 C1orf196B1AJZ1 125 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 SEC11AP67812 179 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 SS18Q15532 418 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 CBLN2Q8IUK8 224 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 ZNF664Q8N3J9 261 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
CLDN4-204ENST00000466411 YPEL4Q96NS1 127 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 C2orf88Q9BSF0 95 aa4.64□□□□□ -1.67
CLDN4-204ENST00000466411 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms