RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ORMDL2Q53FV1 153 aa11.29□□□□□ -0.6
USP39-211ENST00000465282 HECTD4Q9Y4D8 3996 aa11.29□□□□□ -0.6
USP39-211ENST00000465282 A0A087WTM6 91 aa11.28□□□□□ -0.6
USP39-211ENST00000465282 CBLN2Q8IUK8 224 aa11.28□□□□□ -0.6
USP39-211ENST00000465282 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
USP39-211ENST00000465282 ZNF664Q8N3J9 261 aa11.27□□□□□ -0.61
USP39-211ENST00000465282 CDC42SE2Q9NRR3 84 aa11.27□□□□□ -0.61
USP39-211ENST00000465282 SPANXA1Q9NS26 97 aa11.27□□□□□ -0.61
USP39-211ENST00000465282 LRCOL1A6NCL2 159 aa11.26□□□□□ -0.61
USP39-211ENST00000465282 IFI27P40305 119 aaPredicted RBP11.26□□□□□ -0.61
USP39-211ENST00000465282 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
USP39-211ENST00000465282 PRSS3P2Q8NHM4 247 aa11.26□□□□□ -0.61
USP39-211ENST00000465282 CCL25O15444 150 aa11.25□□□□□ -0.61
USP39-211ENST00000465282 PYGO1Q9Y3Y4 419 aa11.25□□□□□ -0.61
USP39-211ENST00000465282 LINC01546A6NGU7 62 aa11.24□□□□□ -0.61
USP39-211ENST00000465282 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
USP39-211ENST00000465282 MRPS36P82909 103 aaKnown RBP11.24□□□□□ -0.61
USP39-211ENST00000465282 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
USP39-211ENST00000465282 LINC01549A6NIU2 74 aa11.23□□□□□ -0.61
USP39-211ENST00000465282 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
USP39-211ENST00000465282 MAPKAPK5-AS1Q8N8E1 139 aa11.23□□□□□ -0.61
USP39-211ENST00000465282 CYSLTR1Q9Y271 337 aa11.23□□□□□ -0.61
USP39-211ENST00000465282 NPSP0C0P6 89 aa11.22□□□□□ -0.61
USP39-211ENST00000465282 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 PKHD1P08F94 4074 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 IGLV10-54A0A075B6I4 117 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 SS18Q15532 418 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 C14orf177Q52M58 125 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 C2orf66Q6UXQ4 117 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 FA2HQ7L5A8 372 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 BAALCQ8WXS3 180 aa11.21□□□□□ -0.61
USP39-211ENST00000465282 LINC00959A0A1B0GUT2 108 aa11.2□□□□□ -0.62
USP39-211ENST00000465282 C1orf196B1AJZ1 125 aa11.2□□□□□ -0.62
USP39-211ENST00000465282 RAB5BP61020 215 aa11.2□□□□□ -0.62
USP39-211ENST00000465282 Q8N814 137 aa11.2□□□□□ -0.62
USP39-211ENST00000465282 NTN5Q8WTR8 489 aaPredicted RBP11.2□□□□□ -0.62
USP39-211ENST00000465282 IGKV3OR2-268A0A0C4DH90 116 aa11.19□□□□□ -0.62
USP39-211ENST00000465282 COLCA2A8K830 154 aa11.19□□□□□ -0.62
USP39-211ENST00000465282 S100A1P23297 94 aa11.19□□□□□ -0.62
USP39-211ENST00000465282 Q6ZUT4 128 aa11.19□□□□□ -0.62
USP39-211ENST00000465282 CHCHD10Q8WYQ3 142 aaPredicted RBP11.19□□□□□ -0.62
USP39-211ENST00000465282 LINC00614P0C842 121 aa11.18□□□□□ -0.62
USP39-211ENST00000465282 TOMM6Q96B49 74 aa11.18□□□□□ -0.62
USP39-211ENST00000465282 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
USP39-211ENST00000465282 KRTAP10-2P60368 255 aa11.17□□□□□ -0.62
USP39-211ENST00000465282 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
USP39-211ENST00000465282 FAM104AQ969W3 186 aa11.17□□□□□ -0.62
USP39-211ENST00000465282 TMEM141Q96I45 108 aa11.17□□□□□ -0.62
USP39-211ENST00000465282 IGLV4-3A0A075B6K6 122 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 GAGE12HA6NDE8 117 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 TRGC2P03986 189 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 WFDC2Q14508 124 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 CD164L2Q6UWJ8 174 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 Q6ZN92 141 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 TIMM17AQ99595 171 aa11.16□□□□□ -0.62
USP39-211ENST00000465282 C16orf90A8MZG2 172 aa11.15□□□□□ -0.62
USP39-211ENST00000465282 USP17L23D6RBM5 183 aa11.15□□□□□ -0.62
USP39-211ENST00000465282 LECT2O14960 151 aa11.15□□□□□ -0.62
USP39-211ENST00000465282 ERASQ7Z444 233 aa11.15□□□□□ -0.62
USP39-211ENST00000465282 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
USP39-211ENST00000465282 XCL1P47992 114 aa11.14□□□□□ -0.63
USP39-211ENST00000465282 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
USP39-211ENST00000465282 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
USP39-211ENST00000465282 C2orf88Q9BSF0 95 aa11.14□□□□□ -0.63
USP39-211ENST00000465282 VCX2Q9H322 139 aa11.14□□□□□ -0.63
USP39-211ENST00000465282 SCO1O75880 301 aa11.13□□□□□ -0.63
USP39-211ENST00000465282 FOXI1Q12951 378 aa11.13□□□□□ -0.63
USP39-211ENST00000465282 TEX43Q6ZNM6 134 aa11.13□□□□□ -0.63
USP39-211ENST00000465282 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
USP39-211ENST00000465282 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
USP39-211ENST00000465282 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
USP39-211ENST00000465282 IFITM10A6NMD0 228 aa11.12□□□□□ -0.63
USP39-211ENST00000465282 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
USP39-211ENST00000465282 AMELXQ99217 191 aa11.12□□□□□ -0.63
USP39-211ENST00000465282 KRTAP17-1Q9BYP8 105 aa11.11□□□□□ -0.63
USP39-211ENST00000465282 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
USP39-211ENST00000465282 HBDP02042 147 aa11.1□□□□□ -0.63
USP39-211ENST00000465282 COX7A2LO14548 114 aa11.09□□□□□ -0.63
USP39-211ENST00000465282 PRSS1P07477 247 aa11.09□□□□□ -0.63
USP39-211ENST00000465282 GCSHP23434 173 aa11.09□□□□□ -0.63
USP39-211ENST00000465282 BAGE3Q86Y29 109 aa11.09□□□□□ -0.63
USP39-211ENST00000465282 DYNC1H1Q14204 4646 aaKnown RBP11.08□□□□□ -0.63
USP39-211ENST00000465282 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.08□□□□□ -0.64
USP39-211ENST00000465282 IGHV1-58A0A0C4DH39 117 aa11.08□□□□□ -0.64
USP39-211ENST00000465282 SEC11AP67812 179 aa11.08□□□□□ -0.64
USP39-211ENST00000465282 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
USP39-211ENST00000465282 A0A096LNJ9 63 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 IGHV3OR16-9A0A0B4J2B5 98 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 hDV102S1A0JD36 115 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
USP39-211ENST00000465282 MALP21145 153 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 UBE2D1P51668 147 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
USP39-211ENST00000465282 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms