RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.874e-7■■■□□ 15.3
SQSTM1-205ENST00000464493 SMAGPQ0VAQ4 97 aa9.59□□□□□ -0.87
SQSTM1-205ENST00000464493 WFDC2Q14508 124 aa9.59□□□□□ -0.87
SQSTM1-205ENST00000464493 DGAT2L7PQ6IED9 249 aa9.59□□□□□ -0.87
SQSTM1-205ENST00000464493 CDPF1Q6NVV7 123 aa9.59□□□□□ -0.87
SQSTM1-205ENST00000464493 TGIF2-C20orf24A0A0A6YYL0 155 aa9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
SQSTM1-205ENST00000464493 MT-ND6P03923 174 aa9.57□□□□□ -0.88
SQSTM1-205ENST00000464493 ZNF664Q8N3J9 261 aa9.57□□□□□ -0.88
SQSTM1-205ENST00000464493 Q8N8P6 123 aa9.57□□□□□ -0.88
SQSTM1-205ENST00000464493 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
SQSTM1-205ENST00000464493 FABP9Q0Z7S8 132 aa9.56□□□□□ -0.88
SQSTM1-205ENST00000464493 NTN5Q8WTR8 489 aaPredicted RBP9.56□□□□□ -0.88
SQSTM1-205ENST00000464493 TIMM21Q9BVV7 248 aa9.56□□□□□ -0.88
SQSTM1-205ENST00000464493 MRPL18Q9H0U6 180 aaKnown RBP9.56□□□□□ -0.88
SQSTM1-205ENST00000464493 LRP1BQ9NZR2 4599 aa9.55□□□□□ -0.88
SQSTM1-205ENST00000464493 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
SQSTM1-205ENST00000464493 NXT2Q9NPJ8 142 aaKnown RBP9.55□□□□□ -0.88
SQSTM1-205ENST00000464493 K7EMI3 77 aa9.54□□□□□ -0.88
SQSTM1-205ENST00000464493 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-205ENST00000464493 C14orf177Q52M58 125 aa9.54□□□□□ -0.88
SQSTM1-205ENST00000464493 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-205ENST00000464493 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1-205ENST00000464493 TRAPPC1Q9Y5R8 145 aa9.54□□□□□ -0.88
SQSTM1-205ENST00000464493 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1-205ENST00000464493 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
SQSTM1-205ENST00000464493 GAGE12HA6NDE8 117 aa9.53□□□□□ -0.88
SQSTM1-205ENST00000464493 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
SQSTM1-205ENST00000464493 ORMDL2Q53FV1 153 aa9.53□□□□□ -0.88
SQSTM1-205ENST00000464493 SPANXA1Q9NS26 97 aa9.53□□□□□ -0.88
SQSTM1-205ENST00000464493 GCSHP23434 173 aa9.52□□□□□ -0.89
SQSTM1-205ENST00000464493 SS18Q15532 418 aa9.52□□□□□ -0.89
SQSTM1-205ENST00000464493 PRSS3P2Q8NHM4 247 aa9.52□□□□□ -0.89
SQSTM1-205ENST00000464493 YPEL4Q96NS1 127 aa9.52□□□□□ -0.89
SQSTM1-205ENST00000464493 SMCO4Q9NRQ5 59 aa9.52□□□□□ -0.89
SQSTM1-205ENST00000464493 RNASE13Q5GAN3 156 aaKnown RBP9.51□□□□□ -0.89
SQSTM1-205ENST00000464493 Q6ZUT4 128 aa9.51□□□□□ -0.89
SQSTM1-205ENST00000464493 CCL25O15444 150 aa9.5□□□□□ -0.89
SQSTM1-205ENST00000464493 XCL1P47992 114 aa9.5□□□□□ -0.89
SQSTM1-205ENST00000464493 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
SQSTM1-205ENST00000464493 CBLN2Q8IUK8 224 aa9.5□□□□□ -0.89
SQSTM1-205ENST00000464493 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
SQSTM1-205ENST00000464493 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
SQSTM1-205ENST00000464493 C1orf196B1AJZ1 125 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 PRSS1P07477 247 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 G0S2P27469 103 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 FOXI1Q12951 378 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 CFAP161Q6P656 301 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 C2orf66Q6UXQ4 117 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 OPRPNQ99935 248 aaPredicted RBP9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 CYSLTR1Q9Y271 337 aa9.49□□□□□ -0.89
SQSTM1-205ENST00000464493 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
SQSTM1-205ENST00000464493 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
SQSTM1-205ENST00000464493 LINC01546A6NGU7 62 aa9.47□□□□□ -0.89
SQSTM1-205ENST00000464493 CDK2AP2O75956 126 aa9.47□□□□□ -0.89
SQSTM1-205ENST00000464493 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
SQSTM1-205ENST00000464493 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
SQSTM1-205ENST00000464493 hDV102S1A0JD36 115 aa9.46□□□□□ -0.9
SQSTM1-205ENST00000464493 FA2HQ7L5A8 372 aa9.46□□□□□ -0.9
SQSTM1-205ENST00000464493 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
SQSTM1-205ENST00000464493 C15orf56Q8N910 161 aa9.45□□□□□ -0.9
SQSTM1-205ENST00000464493 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
SQSTM1-205ENST00000464493 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
SQSTM1-205ENST00000464493 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
SQSTM1-205ENST00000464493 IFITM10A6NMD0 228 aa9.44□□□□□ -0.9
SQSTM1-205ENST00000464493 NPSP0C0P6 89 aa9.44□□□□□ -0.9
SQSTM1-205ENST00000464493 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
SQSTM1-205ENST00000464493 AP5S1Q9NUS5 200 aa9.44□□□□□ -0.9
SQSTM1-205ENST00000464493 APOBP04114 4563 aaKnown RBP9.44□□□□□ -0.9
SQSTM1-205ENST00000464493 COX7A2LO14548 114 aa9.43□□□□□ -0.9
SQSTM1-205ENST00000464493 LINC00614P0C842 121 aa9.43□□□□□ -0.9
SQSTM1-205ENST00000464493 Q6ZN92 141 aa9.43□□□□□ -0.9
SQSTM1-205ENST00000464493 TEX43Q6ZNM6 134 aa9.43□□□□□ -0.9
SQSTM1-205ENST00000464493 VCX2Q9H322 139 aa9.43□□□□□ -0.9
SQSTM1-205ENST00000464493 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 HIGD2BQ4VC39 106 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 ERASQ7Z444 233 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 C2orf88Q9BSF0 95 aa9.42□□□□□ -0.9
SQSTM1-205ENST00000464493 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 SLPIP03973 132 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 MALP21145 153 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 RAB5BP61020 215 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 PAPPA-AS1Q5QFB9 102 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 C9orf163Q8N9P6 203 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 AMELXQ99217 191 aa9.41□□□□□ -0.9
SQSTM1-205ENST00000464493 HSPG2P98160 4391 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms