RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CCL3L1P16619 93 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 FXYD3Q14802 87 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 VMO1Q7Z5L0 202 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 SPCS1Q9Y6A9 102 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 MRC1P22897 1456 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 NLRP1Q9C000 1473 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 NRXN1Q9ULB1 1477 aa1.74□□□□□ -2.13
ITGB1-208ENST00000464001 MED13LQ71F56 2210 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 M0R2N4 97 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 ETDBQ3ZM63 59 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 SPATA45Q537H7 98 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 DEFB132Q7Z7B7 95 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 FAM223AQ8IWN6 122 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 COX7B2Q8TF08 81 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 DYNLRB1Q9NP97 96 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 KNDC1Q76NI1 1749 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 IFT172Q9UG01 1749 aa1.73□□□□□ -2.13
ITGB1-208ENST00000464001 BLMP54132 1417 aaPredicted RBP1.73□□□□□ -2.13
ITGB1-208ENST00000464001 ABCA8O94911 1581 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 EHBP1L1Q8N3D4 1523 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 IGLV3-32A0A0A0MS00 114 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 C10orf142B7Z368 130 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 HMGN4O00479 90 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 PPP1R17O96001 155 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 FXYD4P59646 89 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 ST20Q9HBF5 79 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 LENEPQ9Y5L5 61 aa1.72□□□□□ -2.13
ITGB1-208ENST00000464001 HMGXB3Q12766 1538 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 TRGV2A0A075B6R0 118 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 IGKV2-40A0A087WW87 121 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-208ENST00000464001 LOC110117498A0A087WWA1 95 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 IGKV2D-40P01614 121 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-208ENST00000464001 ELOF1P60002 83 aaKnown RBP1.71□□□□□ -2.14
ITGB1-208ENST00000464001 WFDC2Q14508 124 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 ADIRFQ15847 76 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 RABAC1Q9UI14 185 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 CLIP1P30622 1438 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 NCOA6Q14686 2063 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-208ENST00000464001 VWDEQ8N2E2 1590 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 CFAP74Q9C0B2 1584 aa1.71□□□□□ -2.14
ITGB1-208ENST00000464001 PTPN23Q9H3S7 1636 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 A0A087WTM6 91 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 A0A1W2PPM0 123 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 COX6CP09669 75 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 SPAG11BQ08648 103 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 NMSQ5H8A3 153 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 SPAG11AQ6PDA7 123 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
ITGB1-208ENST00000464001 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
ITGB1-208ENST00000464001 ITSN1Q15811 1721 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 TMEM14DPA8MWL7 114 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 FXYD1O00168 92 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 EFNA4P52798 201 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 KLKP1Q107X0 134 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 GDF5OSQ5U4N7 250 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 XAF1Q6GPH4 301 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 V9GYH0 126 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 UGGT2Q9NYU1 1516 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 CRYBG1Q9Y4K1 1723 aa1.69□□□□□ -2.14
ITGB1-208ENST00000464001 TRBV25-1A0A075B6N4 114 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.68□□□□□ -2.14
ITGB1-208ENST00000464001 SMIM31A0A1B0GVY4 71 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 J3QRE1 110 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 CCL18P55774 89 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 DEFB103AP81534 67 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 Q5BKY6 102 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 BVES-AS1Q5T3Y7 98 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 FAM74A4Q5TZK3 123 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 SNURFQ9Y675 71 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 MROH1Q8NDA8 1641 aa1.68□□□□□ -2.14
ITGB1-208ENST00000464001 COL4A1P02462 1669 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 FAM223BA6NKX1 122 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 IGLC2P0DOY2 106 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 IGLC3P0DOY3 106 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 DEFA5Q01523 94 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 ARL2-SNX15V9GYD0 113 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 V9GYV3 84 aa1.67□□□□□ -2.14
ITGB1-208ENST00000464001 CACNA1GO43497 2377 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.66□□□□□ -2.14
ITGB1-208ENST00000464001 LOC285095A0A1B0GVY8 99 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 F2Z2F3 143 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 F8WEM9 126 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 H3BUT2 72 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 SMCO4Q9NRQ5 59 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 TMEM14BQ9NUH8 114 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 IQSEC2Q5JU85 1478 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 ABCA1O95477 2261 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 MYO7AQ13402 2215 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 PKD1L3Q7Z443 1732 aa1.66□□□□□ -2.14
ITGB1-208ENST00000464001 NEXMIFQ5QGS0 1516 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms