RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 SH2D6Q7Z4S9 175 aa13.22□□□□□ -0.29
CCDC78-206ENST00000463539 MRPL52Q86TS9 123 aaKnown RBP13.22□□□□□ -0.29
CCDC78-206ENST00000463539 PRO1933Q9H354 126 aa13.22□□□□□ -0.29
CCDC78-206ENST00000463539 DEFB131BA0A096LNP1 70 aa13.21□□□□□ -0.29
CCDC78-206ENST00000463539 PCP4L1A6NKN8 68 aa13.21□□□□□ -0.29
CCDC78-206ENST00000463539 TSTD3H0UI37 97 aa13.21□□□□□ -0.29
CCDC78-206ENST00000463539 AMMECR1LQ6DCA0 310 aa13.21□□□□□ -0.29
CCDC78-206ENST00000463539 CHCHD5Q9BSY4 110 aa13.21□□□□□ -0.29
CCDC78-206ENST00000463539 H3BNG1 76 aa13.2□□□□□ -0.3
CCDC78-206ENST00000463539 Q6ZUT4 128 aa13.2□□□□□ -0.3
CCDC78-206ENST00000463539 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
CCDC78-206ENST00000463539 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
CCDC78-206ENST00000463539 CSDC2Q9Y534 153 aaKnown RBP13.2□□□□□ -0.3
CCDC78-206ENST00000463539 GAGE6Q13070 117 aa13.19□□□□□ -0.3
CCDC78-206ENST00000463539 RNASE13Q5GAN3 156 aaKnown RBP13.19□□□□□ -0.3
CCDC78-206ENST00000463539 AMELXQ99217 191 aa13.19□□□□□ -0.3
CCDC78-206ENST00000463539 MEGF8Q7Z7M0 2845 aa13.19□□□□□ -0.3
CCDC78-206ENST00000463539 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
CCDC78-206ENST00000463539 TMEM101Q96IK0 257 aa13.18□□□□□ -0.3
CCDC78-206ENST00000463539 STPG4Q8N801 248 aa13.18□□□□□ -0.3
CCDC78-206ENST00000463539 IGLV4-69A0A075B6H9 119 aa13.17□□□□□ -0.3
CCDC78-206ENST00000463539 ZNF25P17030 456 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-206ENST00000463539 C2orf88Q9BSF0 95 aa13.17□□□□□ -0.3
CCDC78-206ENST00000463539 STAB2Q8WWQ8 2551 aa13.16□□□□□ -0.3
CCDC78-206ENST00000463539 TRAV10A0A0B4J240 114 aa13.16□□□□□ -0.3
CCDC78-206ENST00000463539 DEFA6Q01524 100 aa13.16□□□□□ -0.3
CCDC78-206ENST00000463539 DNAH9Q9NYC9 4486 aa13.16□□□□□ -0.3
CCDC78-206ENST00000463539 CDC42SE2Q9NRR3 84 aa13.15□□□□□ -0.3
CCDC78-206ENST00000463539 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-206ENST00000463539 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
CCDC78-206ENST00000463539 C11orf86A6NJI1 115 aa13.13□□□□□ -0.31
CCDC78-206ENST00000463539 CHAC1Q9BUX1 264 aa13.13□□□□□ -0.31
CCDC78-206ENST00000463539 TMEM262E9PQX1 116 aa13.13□□□□□ -0.31
CCDC78-206ENST00000463539 IGLC3P0DOY3 106 aa13.13□□□□□ -0.31
CCDC78-206ENST00000463539 TCTAP57738 103 aa13.13□□□□□ -0.31
CCDC78-206ENST00000463539 A0A0J9YXV3 536 aa13.12□□□□□ -0.31
CCDC78-206ENST00000463539 LELP1Q5T871 98 aa13.12□□□□□ -0.31
CCDC78-206ENST00000463539 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
CCDC78-206ENST00000463539 C14orf144Q96I85 54 aa13.11□□□□□ -0.31
CCDC78-206ENST00000463539 COL7A1Q02388 2944 aa13.11□□□□□ -0.31
CCDC78-206ENST00000463539 LYPD5Q6UWN5 251 aa13.11□□□□□ -0.31
CCDC78-206ENST00000463539 IGLV4-60A0A075B6I1 120 aa13.1□□□□□ -0.31
CCDC78-206ENST00000463539 UBE2D1P51668 147 aa13.1□□□□□ -0.31
CCDC78-206ENST00000463539 TIRAPP58753 221 aa13.1□□□□□ -0.31
CCDC78-206ENST00000463539 DDTP30046 118 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 RBX1P62877 108 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 TMEM170BQ5T4T1 132 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 MIEN1Q9BRT3 115 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 UQCR10Q9UDW1 63 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 A0A1B0GUV1 79 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 NMUP48645 174 aa13.09□□□□□ -0.31
CCDC78-206ENST00000463539 TINCRA0A1B0GVN0 87 aa13.08□□□□□ -0.32
CCDC78-206ENST00000463539 TRAV13-1A0A0B4J241 112 aa13.07□□□□□ -0.32
CCDC78-206ENST00000463539 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
CCDC78-206ENST00000463539 HERVK_113P61574 105 aa13.06□□□□□ -0.32
CCDC78-206ENST00000463539 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
CCDC78-206ENST00000463539 GEMIN7Q9H840 131 aaKnown RBP13.06□□□□□ -0.32
CCDC78-206ENST00000463539 PRKDCP78527 4128 aaKnown RBP13.06□□□□□ -0.32
CCDC78-206ENST00000463539 IGKV2D-26A0A0A0MRZ7 120 aa13.06□□□□□ -0.32
CCDC78-206ENST00000463539 TRAV8-6A0A0B4J262 113 aa13.06□□□□□ -0.32
CCDC78-206ENST00000463539 COX8AP10176 69 aa13.06□□□□□ -0.32
CCDC78-206ENST00000463539 SLC25A34Q6PIV7 304 aa13.06□□□□□ -0.32
CCDC78-206ENST00000463539 SEC11AP67812 179 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 LINC00242Q5T6M2 205 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 IGKV3OR2-268A0A0C4DH90 116 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 E9PLD3 99 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 HERVK_113P63121 156 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 TP73-AS1Q9UF72 201 aa13.04□□□□□ -0.32
CCDC78-206ENST00000463539 ESRGQ1W209 222 aa13.03□□□□□ -0.32
CCDC78-206ENST00000463539 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
CCDC78-206ENST00000463539 TMEM223A0PJW6 202 aa13.02□□□□□ -0.32
CCDC78-206ENST00000463539 IGLL5B9A064 214 aa13.02□□□□□ -0.32
CCDC78-206ENST00000463539 Q8N3U1 123 aa13.02□□□□□ -0.32
CCDC78-206ENST00000463539 LINC00587B1AMM8 73 aa13.02□□□□□ -0.33
CCDC78-206ENST00000463539 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
CCDC78-206ENST00000463539 ANGP03950 147 aaKnown RBP13.01□□□□□ -0.33
CCDC78-206ENST00000463539 BOD1L2Q8IYS8 172 aa13.01□□□□□ -0.33
CCDC78-206ENST00000463539 HNRNPA3P51991 378 aaKnown RBP13□□□□□ -0.33
CCDC78-206ENST00000463539 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
CCDC78-206ENST00000463539 H3BRM9 83 aa12.99□□□□□ -0.33
CCDC78-206ENST00000463539 COX6A2Q02221 97 aa12.99□□□□□ -0.33
CCDC78-206ENST00000463539 WFDC10BQ8IUB3 73 aa12.99□□□□□ -0.33
CCDC78-206ENST00000463539 LINC00269Q8N2A0 174 aa12.99□□□□□ -0.33
CCDC78-206ENST00000463539 TTTY13Q9BZ97 58 aa12.99□□□□□ -0.33
CCDC78-206ENST00000463539 CLPSL2Q6UWE3 100 aa12.99□□□□□ -0.33
CCDC78-206ENST00000463539 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
CCDC78-206ENST00000463539 DLEU1O43261 78 aa12.98□□□□□ -0.33
CCDC78-206ENST00000463539 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
CCDC78-206ENST00000463539 SPINK8P0C7L1 97 aa12.97□□□□□ -0.33
CCDC78-206ENST00000463539 REG3AQ06141 175 aa12.97□□□□□ -0.33
CCDC78-206ENST00000463539 SS18Q15532 418 aa12.96□□□□□ -0.33
CCDC78-206ENST00000463539 FBN3Q75N90 2809 aa12.96□□□□□ -0.33
CCDC78-206ENST00000463539 LEPROTO15243 131 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 IGHV3-33P01772 117 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
CCDC78-206ENST00000463539 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms