RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 HYDINQ4G0P3 5121 aa9.36□□□□□ -0.91
PHACTR4-203ENST00000463428 PDZD11Q5EBL8 140 aa9.35□□□□□ -0.91
PHACTR4-203ENST00000463428 OPRPNQ99935 248 aaPredicted RBP9.35□□□□□ -0.91
PHACTR4-203ENST00000463428 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
PHACTR4-203ENST00000463428 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 LINC01549A6NIU2 74 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 HSBP1O75506 76 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 HBDP02042 147 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 ANGP03950 147 aaKnown RBP9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 NDUFA6P56556 154 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 MRPS36P82909 103 aaKnown RBP9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 C10orf126Q8N4M7 172 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 OR5A1Q8NGJ0 315 aa9.34□□□□□ -0.91
PHACTR4-203ENST00000463428 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 M0R2N4 97 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 Q6ZUT4 128 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 ERASQ7Z444 233 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 ZNF664Q8N3J9 261 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 KMT2CQ8NEZ4 4911 aaKnown RBP9.33□□□□□ -0.92
PHACTR4-203ENST00000463428 NPSP0C0P6 89 aa9.32□□□□□ -0.92
PHACTR4-203ENST00000463428 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
PHACTR4-203ENST00000463428 SCGB3A1Q96QR1 104 aa9.32□□□□□ -0.92
PHACTR4-203ENST00000463428 REG3AQ06141 175 aa9.31□□□□□ -0.92
PHACTR4-203ENST00000463428 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
PHACTR4-203ENST00000463428 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
PHACTR4-203ENST00000463428 UBE2WQ96B02 151 aa9.31□□□□□ -0.92
PHACTR4-203ENST00000463428 TMEM141Q96I45 108 aa9.31□□□□□ -0.92
PHACTR4-203ENST00000463428 CLPSL2Q6UWE3 100 aa9.3□□□□□ -0.92
PHACTR4-203ENST00000463428 AMELXQ99217 191 aa9.3□□□□□ -0.92
PHACTR4-203ENST00000463428 TRAV8-3A0A0A6YYJ7 113 aa9.29□□□□□ -0.92
PHACTR4-203ENST00000463428 ZC2HC1BQ5TFG8 222 aa9.29□□□□□ -0.92
PHACTR4-203ENST00000463428 RYR2Q92736 4967 aa9.28□□□□□ -0.92
PHACTR4-203ENST00000463428 LINC00959A0A1B0GUT2 108 aa9.28□□□□□ -0.92
PHACTR4-203ENST00000463428 MIAQ16674 131 aa9.28□□□□□ -0.92
PHACTR4-203ENST00000463428 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
PHACTR4-203ENST00000463428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 ATP5LO75964 103 aa9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 CRPP02741 224 aa9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 Q6ZRN7 208 aaPredicted RBP9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 BAALCQ8WXS3 180 aa9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 VCX2Q9H322 139 aa9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 Q9HAA7 133 aa9.27□□□□□ -0.93
PHACTR4-203ENST00000463428 TRAV8-4A0A0B4J246 113 aa9.26□□□□□ -0.93
PHACTR4-203ENST00000463428 IGKV3OR2-268A0A0C4DH90 116 aa9.26□□□□□ -0.93
PHACTR4-203ENST00000463428 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
PHACTR4-203ENST00000463428 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
PHACTR4-203ENST00000463428 TEX43Q6ZNM6 134 aa9.26□□□□□ -0.93
PHACTR4-203ENST00000463428 S100A6P06703 90 aa9.25□□□□□ -0.93
PHACTR4-203ENST00000463428 FABP4P15090 132 aa9.25□□□□□ -0.93
PHACTR4-203ENST00000463428 C1orf134Q5TEV5 83 aa9.25□□□□□ -0.93
PHACTR4-203ENST00000463428 Q6ZN92 141 aa9.25□□□□□ -0.93
PHACTR4-203ENST00000463428 NFE4Q86UQ8 179 aa9.25□□□□□ -0.93
PHACTR4-203ENST00000463428 IFI27L1Q96BM0 104 aa9.25□□□□□ -0.93
PHACTR4-203ENST00000463428 IGLV10-54A0A075B6I4 117 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 IFITM10A6NMD0 228 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 CCL25O15444 150 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 UBE2D1P51668 147 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 PMVKQ15126 192 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 HIST3H2BBQ8N257 126 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 CST9LQ9H4G1 147 aa9.24□□□□□ -0.93
PHACTR4-203ENST00000463428 IGKV2D-24A0A075B6R9 120 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 SS18Q15532 418 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 DNAH2Q9P225 4427 aa9.23□□□□□ -0.93
PHACTR4-203ENST00000463428 RTL8CO15255 209 aa9.22□□□□□ -0.93
PHACTR4-203ENST00000463428 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
PHACTR4-203ENST00000463428 RMI2Q96E14 147 aa9.22□□□□□ -0.93
PHACTR4-203ENST00000463428 C2orf88Q9BSF0 95 aa9.22□□□□□ -0.93
PHACTR4-203ENST00000463428 TM2D2Q9BX73 214 aa9.22□□□□□ -0.93
PHACTR4-203ENST00000463428 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.93
PHACTR4-203ENST00000463428 TRAV12-1A0A0B4J245 112 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 GAGE12HA6NDE8 117 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 PRSS1P07477 247 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 COX6A2Q02221 97 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 FOXI1Q12951 378 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 CD164L2Q6UWJ8 174 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 COX11Q9Y6N1 276 aa9.21□□□□□ -0.94
PHACTR4-203ENST00000463428 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
PHACTR4-203ENST00000463428 XCL1P47992 114 aa9.2□□□□□ -0.94
PHACTR4-203ENST00000463428 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
PHACTR4-203ENST00000463428 TMA7Q9Y2S6 64 aaKnown RBP9.2□□□□□ -0.94
PHACTR4-203ENST00000463428 FRAS1Q86XX4 4008 aa9.2□□□□□ -0.94
PHACTR4-203ENST00000463428 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms