RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	SMIM2	Q9BVW6	85 aa		6.35	□□□□□ -1.39
PSMD4-208	ENST00000462970	MRPL18	Q9H0U6	180 aa	Known RBP	6.35	□□□□□ -1.39
PSMD4-208	ENST00000462970	LOC389332	A0A1B0GUA5	103 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	GAGE12H	A6NDE8	117 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	APOC3	P02656	99 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	S100A1	P23297	94 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	KRTAP10-1	P60331	282 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	CLRN3	Q8NCR9	226 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	IMMP2L	Q96T52	175 aa		6.34	□□□□□ -1.39
PSMD4-208	ENST00000462970	TRBV24-1	A0A075B6N3	115 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	TRAV8-4	A0A0B4J246	113 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	TCAP	O15273	167 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	ESD	P10768	282 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	ZNF25	P17030	456 aa	Predicted RBP	6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	RAB5A	P20339	215 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	SMAGP	Q0VAQ4	97 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	RHEB	Q15382	184 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	C14orf177	Q52M58	125 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	TMEM18	Q96B42	140 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	KRTAP4-5	Q9BYR2	181 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	MAP1LC3A	Q9H492	121 aa		6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	CARHSP1	Q9Y2V2	147 aa	Known RBP	6.33	□□□□□ -1.4
PSMD4-208	ENST00000462970	FAM229A	H3BQW9	127 aa		6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	PHOX2A	O14813	284 aa		6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	KIAA1644	Q3SXP7	199 aa		6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	LINC01620	Q4KN68	170 aa		6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	RNASE13	Q5GAN3	156 aa	Known RBP	6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	C10orf91	Q5T1B1	145 aa		6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	LCE2A	Q5TA79	106 aa	Predicted RBP	6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.32	□□□□□ -1.4
PSMD4-208	ENST00000462970	TRAV9-1	A0A075B6T8	112 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	CDK2AP2	O75956	126 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	XCL1	P47992	114 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	RPL39	P62891	51 aa	Known RBP	6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	RPL32	P62910	135 aa	Known RBP	6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	HAMP	P81172	84 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	SS18	Q15532	418 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	KRTAP26-1	Q6PEX3	210 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	ZNF664	Q8N3J9	261 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	ABCA13	Q86UQ4	5058 aa		6.31	□□□□□ -1.4
PSMD4-208	ENST00000462970	RYR1	P21817	5038 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	hDV102S1	A0JD36	115 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	CCL25	O15444	150 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	SNAPIN	O95295	136 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	PRSS1	P07477	247 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970		Q6ZUT4	128 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	MRPL52	Q86TS9	123 aa	Known RBP	6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	SVBP	Q8N300	66 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	LAMTOR2	Q9Y2Q5	125 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	UBE2D4	Q9Y2X8	147 aa		6.3	□□□□□ -1.4
PSMD4-208	ENST00000462970	TRAV13-1	A0A0B4J241	112 aa		6.29	□□□□□ -1.4
PSMD4-208	ENST00000462970	LINC00959	A0A1B0GUT2	108 aa		6.29	□□□□□ -1.4
PSMD4-208	ENST00000462970	CDC42SE2	Q9NRR3	84 aa		6.29	□□□□□ -1.4
PSMD4-208	ENST00000462970	AP5S1	Q9NUS5	200 aa		6.29	□□□□□ -1.4
PSMD4-208	ENST00000462970	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970	FABP9	Q0Z7S8	132 aa		6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970	HIGD2B	Q4VC39	106 aa		6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970	CFAP161	Q6P656	301 aa		6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970	SLC7A5P1	Q8MH63	180 aa		6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970		Q8N8P6	123 aa		6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970	OPRPN	Q99935	248 aa	Predicted RBP	6.28	□□□□□ -1.4
PSMD4-208	ENST00000462970	COX19	Q49B96	90 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	PRSS3P2	Q8NHM4	247 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	TIMM21	Q9BVV7	248 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	GNB1L	Q9BYB4	327 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	NXT2	Q9NPJ8	142 aa	Known RBP	6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	SPANXA1	Q9NS26	97 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	DNAH5	Q8TE73	4624 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	LRP1B	Q9NZR2	4599 aa		6.27	□□□□□ -1.41
PSMD4-208	ENST00000462970	IFITM10	A6NMD0	228 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	C1orf196	B1AJZ1	125 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	MT-ND6	P03923	174 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	MAL	P21145	153 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	IFI27	P40305	119 aa	Predicted RBP	6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	FOXI1	Q12951	378 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	FAM30A	Q9NZY2	134 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	CYSLTR1	Q9Y271	337 aa		6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	CSDC2	Q9Y534	153 aa	Known RBP	6.26	□□□□□ -1.41
PSMD4-208	ENST00000462970	PRSS47	A8MTI9	375 aa		6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	SMR3B	P02814	79 aa	Predicted RBP	6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	XG	P55808	180 aa		6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	ORMDL2	Q53FV1	153 aa		6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	C2orf66	Q6UXQ4	117 aa		6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	C15orf56	Q8N910	161 aa		6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	TRAPPC1	Q9Y5R8	145 aa		6.25	□□□□□ -1.41
PSMD4-208	ENST00000462970	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	COX7A2L	O14548	114 aa		6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	CD164L2	Q6UWJ8	174 aa		6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	FA2H	Q7L5A8	372 aa		6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	C5orf38	Q86SI9	138 aa		6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	LINC00526	Q96FQ7	95 aa		6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	APOB	P04114	4563 aa	Known RBP	6.24	□□□□□ -1.41
PSMD4-208	ENST00000462970	HSPG2	P98160	4391 aa		6.23	□□□□□ -1.41
PSMD4-208	ENST00000462970	IGHV1-58	A0A0C4DH39	117 aa		6.23	□□□□□ -1.41
PSMD4-208	ENST00000462970	MRPS36	P82909	103 aa	Known RBP	6.23	□□□□□ -1.41
PSMD4-208	ENST00000462970		Q6ZN92	141 aa		6.23	□□□□□ -1.41
PSMD4-208	ENST00000462970		Q8N1X5	172 aa		6.23	□□□□□ -1.41
PSMD4-208	ENST00000462970	DPH3	Q96FX2	82 aa		6.23	□□□□□ -1.41
PSMD4-208	ENST00000462970	TMEM141	Q96I45	108 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms