RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
APP-211ENST00000462267 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
APP-211ENST00000462267 PAGE4O60829 102 aa8.97□□□□□ -0.97
APP-211ENST00000462267 GATD1Q8NB37 220 aa8.97□□□□□ -0.97
APP-211ENST00000462267 FAM168BA1KXE4 195 aa8.96□□□□□ -0.98
APP-211ENST00000462267 SVIPQ8NHG7 77 aa8.96□□□□□ -0.98
APP-211ENST00000462267 CDC42SE2Q9NRR3 84 aa8.96□□□□□ -0.98
APP-211ENST00000462267 UBE2BP63146 152 aa8.95□□□□□ -0.98
APP-211ENST00000462267 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
APP-211ENST00000462267 IMMP2LQ96T52 175 aa8.95□□□□□ -0.98
APP-211ENST00000462267 XKRY2A2RUG3 117 aa8.94□□□□□ -0.98
APP-211ENST00000462267 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
APP-211ENST00000462267 C1orf196B1AJZ1 125 aa8.94□□□□□ -0.98
APP-211ENST00000462267 LYZL1Q6UWQ5 148 aa8.94□□□□□ -0.98
APP-211ENST00000462267 FAM19A5Q7Z5A7 132 aaPredicted RBP8.94□□□□□ -0.98
APP-211ENST00000462267 RPL39LQ96EH5 51 aaKnown RBP8.94□□□□□ -0.98
APP-211ENST00000462267 G3V3Q6 166 aa8.93□□□□□ -0.98
APP-211ENST00000462267 ZNF861PO60384 105 aa8.93□□□□□ -0.98
APP-211ENST00000462267 PFDN1O60925 122 aa8.93□□□□□ -0.98
APP-211ENST00000462267 CTAG1AP78358 180 aa8.93□□□□□ -0.98
APP-211ENST00000462267 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
APP-211ENST00000462267 MRPL35Q9NZE8 188 aaKnown RBP8.93□□□□□ -0.98
APP-211ENST00000462267 FXYD6-FXYD2A0A087WZ82 144 aa8.92□□□□□ -0.98
APP-211ENST00000462267 I3L3M4 83 aa8.92□□□□□ -0.98
APP-211ENST00000462267 PMCHP20382 165 aa8.92□□□□□ -0.98
APP-211ENST00000462267 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
APP-211ENST00000462267 MRAP2Q96G30 205 aa8.92□□□□□ -0.98
APP-211ENST00000462267 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
APP-211ENST00000462267 M0QXV9 152 aa8.91□□□□□ -0.98
APP-211ENST00000462267 ATP6V1G1O75348 118 aa8.91□□□□□ -0.98
APP-211ENST00000462267 IFNA1P01562 189 aa8.91□□□□□ -0.98
APP-211ENST00000462267 TLX1NBP0CAT3 122 aa8.91□□□□□ -0.98
APP-211ENST00000462267 RPL35P42766 123 aaKnown RBP8.91□□□□□ -0.98
APP-211ENST00000462267 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
APP-211ENST00000462267 Q5BKY6 102 aa8.91□□□□□ -0.98
APP-211ENST00000462267 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
APP-211ENST00000462267 C9orf62Q8N4C0 152 aa8.91□□□□□ -0.98
APP-211ENST00000462267 IGLV7-46A0A075B6I9 117 aa8.9□□□□□ -0.98
APP-211ENST00000462267 A0A087X002 238 aa8.9□□□□□ -0.98
APP-211ENST00000462267 F8WDY8 70 aa8.9□□□□□ -0.98
APP-211ENST00000462267 CRYGAP11844 174 aa8.9□□□□□ -0.98
APP-211ENST00000462267 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.98
APP-211ENST00000462267 TWIST1Q15672 202 aa8.9□□□□□ -0.98
APP-211ENST00000462267 KRTAP7-1Q8IUC3 87 aa8.9□□□□□ -0.98
APP-211ENST00000462267 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
APP-211ENST00000462267 CTRLP40313 264 aa8.89□□□□□ -0.99
APP-211ENST00000462267 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
APP-211ENST00000462267 SLC7A5P1Q8MH63 180 aa8.89□□□□□ -0.99
APP-211ENST00000462267 OR10D4PQ8NGN7 298 aa8.89□□□□□ -0.99
APP-211ENST00000462267 CNFNQ9BYD5 112 aa8.89□□□□□ -0.99
APP-211ENST00000462267 SMLR1H3BR10 107 aa8.88□□□□□ -0.99
APP-211ENST00000462267 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
APP-211ENST00000462267 TRBV6-5A0A0K0K1A5 114 aa8.87□□□□□ -0.99
APP-211ENST00000462267 NDUFA1O15239 70 aa8.87□□□□□ -0.99
APP-211ENST00000462267 ARPC5O15511 151 aa8.87□□□□□ -0.99
APP-211ENST00000462267 TSHBP01222 138 aa8.87□□□□□ -0.99
APP-211ENST00000462267 GAGE2EQ4V326 116 aa8.87□□□□□ -0.99
APP-211ENST00000462267 SFT2D1Q8WV19 159 aa8.87□□□□□ -0.99
APP-211ENST00000462267 GAGE2DQ9UEU5 116 aa8.87□□□□□ -0.99
APP-211ENST00000462267 CENPWQ5EE01 88 aa8.86□□□□□ -0.99
APP-211ENST00000462267 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
APP-211ENST00000462267 SMDT1Q9H4I9 107 aa8.86□□□□□ -0.99
APP-211ENST00000462267 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
APP-211ENST00000462267 TRAV13-1A0A0B4J241 112 aa8.85□□□□□ -0.99
APP-211ENST00000462267 C7orf77A4D0Y5 90 aa8.85□□□□□ -0.99
APP-211ENST00000462267 ZNF345Q14585 488 aa8.85□□□□□ -0.99
APP-211ENST00000462267 LINC00173Q6ZV60 143 aa8.85□□□□□ -0.99
APP-211ENST00000462267 MBD3L1Q8WWY6 194 aa8.85□□□□□ -0.99
APP-211ENST00000462267 SMIM12Q96EX1 92 aa8.85□□□□□ -0.99
APP-211ENST00000462267 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
APP-211ENST00000462267 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
APP-211ENST00000462267 HMSDA8MTL9 139 aa8.84□□□□□ -0.99
APP-211ENST00000462267 NUPR1O60356 82 aa8.84□□□□□ -0.99
APP-211ENST00000462267 C10orf25Q5T742 122 aa8.84□□□□□ -0.99
APP-211ENST00000462267 AKAP14Q86UN6 197 aa8.84□□□□□ -0.99
APP-211ENST00000462267 TCTE3Q8IZS6 198 aa8.84□□□□□ -0.99
APP-211ENST00000462267 KCNRGQ8N5I3 272 aa8.84□□□□□ -0.99
APP-211ENST00000462267 ORAOV1Q8WV07 137 aa8.84□□□□□ -0.99
APP-211ENST00000462267 C11orf52Q96A22 123 aa8.84□□□□□ -0.99
APP-211ENST00000462267 A0A1B0GV50 99 aa8.83□□□□□ -1
APP-211ENST00000462267 SMAGPQ0VAQ4 97 aa8.83□□□□□ -1
APP-211ENST00000462267 ST20Q9HBF5 79 aa8.83□□□□□ -1
APP-211ENST00000462267 C6orf48Q9UBA6 75 aa8.83□□□□□ -1
APP-211ENST00000462267 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
APP-211ENST00000462267 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
APP-211ENST00000462267 RNASE7Q9H1E1 156 aaKnown RBP8.82□□□□□ -1
APP-211ENST00000462267 BIN3Q9NQY0 253 aa8.82□□□□□ -1
APP-211ENST00000462267 RPL28P46779 137 aaKnown RBP8.81□□□□□ -1
APP-211ENST00000462267 GNG4P50150 75 aa8.81□□□□□ -1
APP-211ENST00000462267 FOXA3P55318 350 aaPredicted RBP8.81□□□□□ -1
APP-211ENST00000462267 RNASE13Q5GAN3 156 aaKnown RBP8.81□□□□□ -1
APP-211ENST00000462267 PPDPFQ9H3Y8 114 aa8.81□□□□□ -1
APP-211ENST00000462267 TRBV27A0A0K0K1C4 114 aa8.8□□□□□ -1
APP-211ENST00000462267 A0A1B0GVG6 124 aa8.8□□□□□ -1
APP-211ENST00000462267 KANTRA0A1W2PQU2 76 aa8.8□□□□□ -1
APP-211ENST00000462267 POLR2KP53803 58 aaKnown RBP8.8□□□□□ -1
APP-211ENST00000462267 CCL20P78556 96 aa8.8□□□□□ -1
APP-211ENST00000462267 ASB16-AS1Q495Z4 193 aa8.8□□□□□ -1
APP-211ENST00000462267 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
APP-211ENST00000462267 CTDSP1Q9GZU7 261 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms