RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GVQW2A0A096LPI5 108 aaPredicted RBP2.74□□□□□ -1.97
COPS3-204ENST00000462236 SERTM2A0A1B0GWG4 89 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 ATP6V1G2O95670 118 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 CACNG7P62955 275 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 HBG1P69891 147 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 HBG2P69892 147 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 SMUG1Q53HV7 270 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 KHDC3LQ587J8 217 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 TMEM97Q5BJF2 176 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 INO80EQ8NBZ0 244 aaPredicted RBP2.74□□□□□ -1.97
COPS3-204ENST00000462236 HYLS1Q96M11 299 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 NMES1Q9C002 83 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 WDR61Q9GZS3 305 aaKnown RBP2.74□□□□□ -1.97
COPS3-204ENST00000462236 LINC00474Q9P2X8 69 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 PSG8Q9UQ74 426 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 LSM5Q9Y4Y9 91 aaKnown RBP2.74□□□□□ -1.97
COPS3-204ENST00000462236 V9GYH0 126 aa2.74□□□□□ -1.97
COPS3-204ENST00000462236 TRBV6-1A0A0K0K1D8 114 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 A0A1W2PNN7 141 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 KRBOX1C9JBD0 128 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 H3BVH4 76 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 L7N2F9 121 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 IFNA7P01567 189 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 TCRAP04437 139 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 ARMS2P0C7Q2 107 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 BCAP31P51572 246 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 RAB4BP61018 213 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 FAM74A1Q5RGS3 127 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 FAM74A4Q5TZK3 123 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 FER1L6-AS1Q8NA97 138 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 CMTM2Q8TAZ6 248 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 NDFIP1Q9BT67 221 aa2.73□□□□□ -1.97
COPS3-204ENST00000462236 TRBV25-1A0A075B6N4 114 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 TRAV6A0A075B6T7 132 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 FABP5P3A8MUU1 101 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 IGLV7-43P04211 117 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 S100A4P26447 101 aaKnown RBP2.72□□□□□ -1.97
COPS3-204ENST00000462236 UBE2AP49459 152 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 CRIP1P50238 77 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 TAS2R45P59539 299 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 FLI1Q01543 452 aaPredicted RBP2.72□□□□□ -1.97
COPS3-204ENST00000462236 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 STX12Q86Y82 276 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 C5orf17Q8NAS9 161 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 DIRC1Q969H9 104 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 KRTAP4-3Q9BYR4 195 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 MED28Q9H204 178 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 KCNIP2Q9NS61 270 aa2.72□□□□□ -1.97
COPS3-204ENST00000462236 NAP1L6A6NFF2 107 aa2.71□□□□□ -1.98
COPS3-204ENST00000462236 B4DEV8 164 aa2.71□□□□□ -1.98
COPS3-204ENST00000462236 PVALBP20472 110 aaPredicted RBP2.71□□□□□ -1.98
COPS3-204ENST00000462236 SAPCD1Q5SSQ6 148 aa2.71□□□□□ -1.98
COPS3-204ENST00000462236 DERL1Q9BUN8 251 aa2.71□□□□□ -1.98
COPS3-204ENST00000462236 MRPS26Q9BYN8 205 aaKnown RBP2.71□□□□□ -1.98
COPS3-204ENST00000462236 RPP21Q9H633 154 aaKnown RBP2.71□□□□□ -1.98
COPS3-204ENST00000462236 EPDR1Q9UM22 224 aa2.71□□□□□ -1.98
COPS3-204ENST00000462236 CARHSP1Q9Y2V2 147 aaKnown RBP2.71□□□□□ -1.98
COPS3-204ENST00000462236 IGHV1-24A0A0C4DH33 117 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 XKRY2A2RUG3 117 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 C17orf112F2Z3M2 114 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 STAG3L2P0CL84 134 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 STAG3L3P0CL85 134 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 TAGLN2P37802 199 aaKnown RBP2.7□□□□□ -1.98
COPS3-204ENST00000462236 RAB5CP51148 216 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 TMBIM6P55061 237 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 RAB2AP61019 212 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 PYDC2Q56P42 97 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 C1orf137Q5JT78 98 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 PRNTQ86SH4 94 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 ZFP82Q8N141 532 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 AQP10Q96PS8 301 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 PKIGQ9Y2B9 76 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 PHLDA3Q9Y5J5 127 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 ARL2-SNX15V9GYD0 113 aa2.7□□□□□ -1.98
COPS3-204ENST00000462236 TRAV1-1A0A0B4J248 108 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 GRIFINA4D1Z8 144 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 M0R381 172 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 SH2D1AO60880 128 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 MT-ND6P03923 174 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 CXCL1P09341 107 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 ARL14EPLP0DKL9 152 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 TPT1P13693 172 aaKnown RBP2.69□□□□□ -1.98
COPS3-204ENST00000462236 DEFB116Q30KQ4 102 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 C9orf116Q5BN46 136 aaPredicted RBP2.69□□□□□ -1.98
COPS3-204ENST00000462236 RNASEKQ6P5S7 137 aaKnown RBP2.69□□□□□ -1.98
COPS3-204ENST00000462236 PHF5AQ7RTV0 110 aaKnown RBP2.69□□□□□ -1.98
COPS3-204ENST00000462236 Q86TA4 180 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 CARD19Q96LW7 228 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 ZNF471Q9BX82 626 aaPredicted RBP2.69□□□□□ -1.98
COPS3-204ENST00000462236 CYTL1Q9NRR1 136 aa2.69□□□□□ -1.98
COPS3-204ENST00000462236 CSDC2Q9Y534 153 aaKnown RBP2.69□□□□□ -1.98
COPS3-204ENST00000462236 IGKV2-28A0A075B6P5 120 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 LOC107984640A0A0U1RRK4 108 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 FAM25EA8MYX2 175 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.68□□□□□ -1.98
COPS3-204ENST00000462236 M0QY20 66 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 M0R036 132 aa2.68□□□□□ -1.98
COPS3-204ENST00000462236 IGKV2D-28P01615 120 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms