RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 GFRA4Q9GZZ7 299 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 HSPG2P98160 4391 aa4.37□□□□□ -1.71
SMARCC1-204ENST00000462198 DNAH11Q96DT5 4516 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 FAT2Q9NYQ8 4349 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 AGRNO00468 2067 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 ACYP1P07311 99 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 RPL13AP40429 203 aaKnown RBP4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 FOXA3P55318 350 aaPredicted RBP4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 GOLT1AQ6ZVE7 132 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 LINC00305Q7Z4B0 112 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 ANKRD29Q8N6D5 301 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 C15orf53Q8NAA6 179 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 SHANK2-AS3Q9BTD1 123 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 ZNF492Q9P255 531 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 DNAH2Q9P225 4427 aa4.36□□□□□ -1.71
SMARCC1-204ENST00000462198 TRAV8-2A0A0B4J237 113 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 TRAV8-4A0A0B4J246 113 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 TRAV4A0A0B4J268 109 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 H3BRN7 92 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 CD7P09564 240 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 HLA-DMBP28068 263 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 CMC4P56277 68 aaPredicted RBP4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 PATE2Q6UY27 113 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 TRPT1Q86TN4 253 aaKnown RBP4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 AMN1Q8IY45 258 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 CARD19Q96LW7 228 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 TP73-AS1Q9UF72 201 aa4.35□□□□□ -1.71
SMARCC1-204ENST00000462198 A0A0J9YWU9 116 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 MYMXA0A1B0GTQ4 84 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 HIGD1CA8MV81 97 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 K7EQG2 157 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 ATOX1O00244 68 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 PEX7O00628 323 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 RTL8CO15255 209 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 SPINK4O60575 86 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 CDK2AP2O75956 126 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 NDUFC2O95298 119 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 NPYP01303 97 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 TRACP01848 142 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 COX7CP15954 63 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 CXCL5P42830 114 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 UBE2D3P61077 147 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 SNRPD3P62318 126 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 UBE2D2P62837 147 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 DCANP1Q8TF63 244 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 IFI27L1Q96BM0 104 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 FXYD5Q96DB9 178 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 OVOL2Q9BRP0 275 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 MAP6D1Q9H9H5 199 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
SMARCC1-204ENST00000462198 RBMY1A1P0DJD3 496 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 DEFB131AP59861 70 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 TWIST1Q15672 202 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 MORN5Q5VZ52 161 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 WFDC10AQ9H1F0 79 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 RPP21Q9H633 154 aaKnown RBP4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 JPT2Q9H910 190 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 EPDR1Q9UM22 224 aa4.33□□□□□ -1.72
SMARCC1-204ENST00000462198 TRBV25-1A0A075B6N4 114 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 K7ERJ3 54 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 MRPS12O15235 138 aaKnown RBP4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 LTAP01374 205 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 HBDP02042 147 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 C18orf15Q96N68 181 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 PAXXQ9BUH6 204 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 TMEM14CQ9P0S9 112 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
SMARCC1-204ENST00000462198 TRAV8-1A0A0A6YYK1 113 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 LINC01546A6NGU7 62 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 H3BTX0 84 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 SOCS3O14543 225 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 IGKCP01834 107 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 INAFM2P0DMQ5 153 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 PYYP10082 97 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 RPL35AP18077 110 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 PSMB2P49721 201 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 UBE2L3P68036 154 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 PIK3CD-AS1Q5SR53 167 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 IGFL4Q6B9Z1 124 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 HRCT1Q6UXD1 115 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 ZNF493Q6ZR52 646 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 STHQ8IWL8 128 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 RNF182Q8N6D2 247 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 PRSS3P2Q8NHM4 247 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 DPH3Q96FX2 82 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms