RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 IGHV3OR16-12A0A075B7B8 117 aa13.3□□□□□ -0.28
HPS3-204ENST00000462030 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
HPS3-204ENST00000462030 ZANQ9Y493 2812 aa13.29□□□□□ -0.28
HPS3-204ENST00000462030 DGAT2L7PQ6IED9 249 aa13.29□□□□□ -0.28
HPS3-204ENST00000462030 DNAJC30Q96LL9 226 aa13.29□□□□□ -0.28
HPS3-204ENST00000462030 UTP20O75691 2785 aaKnown RBP13.29□□□□□ -0.28
HPS3-204ENST00000462030 VPREB3Q9UKI3 123 aa13.29□□□□□ -0.28
HPS3-204ENST00000462030 FAM240AA0A1B0GVK7 77 aa13.28□□□□□ -0.28
HPS3-204ENST00000462030 NDUFA7O95182 113 aa13.28□□□□□ -0.28
HPS3-204ENST00000462030 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.29
HPS3-204ENST00000462030 LINC00242Q5T6M2 205 aa13.27□□□□□ -0.29
HPS3-204ENST00000462030 SOSTDC1Q6X4U4 206 aa13.27□□□□□ -0.29
HPS3-204ENST00000462030 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
HPS3-204ENST00000462030 IGLV5-39A0A0G2JS06 123 aa13.27□□□□□ -0.29
HPS3-204ENST00000462030 RS1O15537 224 aa13.27□□□□□ -0.29
HPS3-204ENST00000462030 LINC00694P0DN24 101 aa13.27□□□□□ -0.29
HPS3-204ENST00000462030 MRPL23Q16540 153 aaKnown RBP13.27□□□□□ -0.29
HPS3-204ENST00000462030 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
HPS3-204ENST00000462030 LINC01356Q8N9X3 169 aa13.26□□□□□ -0.29
HPS3-204ENST00000462030 USP9XQ93008 2570 aaPredicted RBP13.26□□□□□ -0.29
HPS3-204ENST00000462030 Q8N2B8 174 aa13.25□□□□□ -0.29
HPS3-204ENST00000462030 HIST2H2BDQ6DRA6 164 aa13.25□□□□□ -0.29
HPS3-204ENST00000462030 HERVK_113P63121 156 aa13.24□□□□□ -0.29
HPS3-204ENST00000462030 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
HPS3-204ENST00000462030 SMIM1B2RUZ4 78 aa13.23□□□□□ -0.29
HPS3-204ENST00000462030 COX7A2LO14548 114 aa13.23□□□□□ -0.29
HPS3-204ENST00000462030 MXRA5Q9NR99 2828 aa13.23□□□□□ -0.29
HPS3-204ENST00000462030 TRAV13-1A0A0B4J241 112 aa13.22□□□□□ -0.29
HPS3-204ENST00000462030 INSP01308 110 aa13.22□□□□□ -0.29
HPS3-204ENST00000462030 XCL2Q9UBD3 114 aa13.21□□□□□ -0.29
HPS3-204ENST00000462030 A0A096LNT2 108 aa13.21□□□□□ -0.29
HPS3-204ENST00000462030 SHISA2Q6UWI4 295 aa13.21□□□□□ -0.29
HPS3-204ENST00000462030 Q6YL49 198 aa13.21□□□□□ -0.29
HPS3-204ENST00000462030 CHCHD5Q9BSY4 110 aa13.21□□□□□ -0.29
HPS3-204ENST00000462030 DOPEY1Q5JWR5 2465 aa13.21□□□□□ -0.3
HPS3-204ENST00000462030 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
HPS3-204ENST00000462030 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
HPS3-204ENST00000462030 PRIMA1Q86XR5 153 aa13.2□□□□□ -0.3
HPS3-204ENST00000462030 POLQO75417 2590 aa13.2□□□□□ -0.3
HPS3-204ENST00000462030 NTM-AS1Q6ZSK4 140 aa13.19□□□□□ -0.3
HPS3-204ENST00000462030 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
HPS3-204ENST00000462030 DSCR9P59020 149 aa13.19□□□□□ -0.3
HPS3-204ENST00000462030 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
HPS3-204ENST00000462030 PEMTQ9UBM1 199 aa13.19□□□□□ -0.3
HPS3-204ENST00000462030 PIEZO1Q92508 2521 aa13.19□□□□□ -0.3
HPS3-204ENST00000462030 MYO18BQ8IUG5 2567 aa13.18□□□□□ -0.3
HPS3-204ENST00000462030 TRGV1A0A0A0MS02 117 aa13.18□□□□□ -0.3
HPS3-204ENST00000462030 SMCR5Q8TEV8 140 aa13.18□□□□□ -0.3
HPS3-204ENST00000462030 ANKRD17O75179 2603 aaKnown RBP13.18□□□□□ -0.3
HPS3-204ENST00000462030 CENPEQ02224 2701 aa13.17□□□□□ -0.3
HPS3-204ENST00000462030 J3QLI3 93 aa13.17□□□□□ -0.3
HPS3-204ENST00000462030 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
HPS3-204ENST00000462030 IGSF10Q6WRI0 2623 aa13.17□□□□□ -0.3
HPS3-204ENST00000462030 F5H768 121 aa13.17□□□□□ -0.3
HPS3-204ENST00000462030 DAZ2Q13117 558 aaKnown RBP13.17□□□□□ -0.3
HPS3-204ENST00000462030 DAZ4Q86SG3 579 aaKnown RBP13.17□□□□□ -0.3
HPS3-204ENST00000462030 FAM218AQ96MZ4 157 aa13.17□□□□□ -0.3
HPS3-204ENST00000462030 DAZ3Q9NR90 486 aaKnown RBP13.17□□□□□ -0.3
HPS3-204ENST00000462030 DEFB114Q30KQ6 69 aa13.16□□□□□ -0.3
HPS3-204ENST00000462030 C1orf158Q8N1D5 194 aa13.16□□□□□ -0.3
HPS3-204ENST00000462030 CUBNO60494 3623 aa13.15□□□□□ -0.3
HPS3-204ENST00000462030 FSHBP01225 129 aa13.15□□□□□ -0.3
HPS3-204ENST00000462030 Q96MF0 132 aa13.15□□□□□ -0.3
HPS3-204ENST00000462030 C22orf24Q9Y442 160 aa13.15□□□□□ -0.3
HPS3-204ENST00000462030 RPL36AP83881 106 aaKnown RBP13.14□□□□□ -0.31
HPS3-204ENST00000462030 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 COPS9Q8WXC6 57 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 RPL36ALQ969Q0 106 aaKnown RBP13.14□□□□□ -0.31
HPS3-204ENST00000462030 CDC42SE2Q9NRR3 84 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 K7EQD1 137 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 ACYP1P07311 99 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 ODF3L2Q3SX64 289 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 Q6ZTI0 123 aa13.14□□□□□ -0.31
HPS3-204ENST00000462030 CSDC2Q9Y534 153 aaKnown RBP13.14□□□□□ -0.31
HPS3-204ENST00000462030 CACNA1AO00555 2505 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 FAM236AA0A1B0GUQ0 79 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 FAM236BA0A1B0GV22 79 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 TRACP01848 142 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 BAALC-AS2P0C853 105 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
HPS3-204ENST00000462030 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
HPS3-204ENST00000462030 ACACBO00763 2458 aa13.12□□□□□ -0.31
HPS3-204ENST00000462030 FBN2P35556 2912 aa13.12□□□□□ -0.31
HPS3-204ENST00000462030 C2CD3Q4AC94 2353 aa13.11□□□□□ -0.31
HPS3-204ENST00000462030 FAM208BQ5VWN6 2430 aa13.11□□□□□ -0.31
HPS3-204ENST00000462030 HERV-K104P63124 156 aa13.11□□□□□ -0.31
HPS3-204ENST00000462030 SMIM20Q8N5G0 67 aa13.11□□□□□ -0.31
HPS3-204ENST00000462030 STHQ8IWL8 128 aa13.1□□□□□ -0.31
HPS3-204ENST00000462030 Q9HAA7 133 aa13.1□□□□□ -0.31
HPS3-204ENST00000462030 CR1P17927 2039 aa13.1□□□□□ -0.31
HPS3-204ENST00000462030 TRBV10-1A0A0K0K1A3 114 aa13.1□□□□□ -0.31
HPS3-204ENST00000462030 WNK1Q9H4A3 2382 aa13.09□□□□□ -0.31
HPS3-204ENST00000462030 IGHV4-31P0DP07 118 aa13.08□□□□□ -0.31
HPS3-204ENST00000462030 LINC00643Q86TS7 51 aa13.08□□□□□ -0.32
HPS3-204ENST00000462030 IMUPQ9GZP8 106 aa13.08□□□□□ -0.32
HPS3-204ENST00000462030 AKAP9Q99996 3911 aa13.08□□□□□ -0.32
HPS3-204ENST00000462030 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
HPS3-204ENST00000462030 CHD6Q8TD26 2715 aa13.07□□□□□ -0.32
HPS3-204ENST00000462030 HIST2H2BCQ6DN03 193 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms