RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
COL4A6-204ENST00000461897 A4D1N5 150 aa9.01□□□□□ -0.97
COL4A6-204ENST00000461897 TRAV16A0A0A6YYK6 109 aaPredicted RBP9□□□□□ -0.97
COL4A6-204ENST00000461897 A8MWV9 139 aa9□□□□□ -0.97
COL4A6-204ENST00000461897 CARD19Q96LW7 228 aa9□□□□□ -0.97
COL4A6-204ENST00000461897 LINC00467Q9BRT7 94 aa9□□□□□ -0.97
COL4A6-204ENST00000461897 CIDEAO60543 219 aa9□□□□□ -0.97
COL4A6-204ENST00000461897 CITED1Q99966 193 aa9□□□□□ -0.97
COL4A6-204ENST00000461897 ATRQ13535 2644 aa8.99□□□□□ -0.97
COL4A6-204ENST00000461897 TEP1Q99973 2627 aaKnown RBP8.99□□□□□ -0.97
COL4A6-204ENST00000461897 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
COL4A6-204ENST00000461897 SPATA3Q8NHX4 192 aa8.99□□□□□ -0.97
COL4A6-204ENST00000461897 LITAFQ99732 161 aa8.99□□□□□ -0.97
COL4A6-204ENST00000461897 TRRAPQ9Y4A5 3859 aa8.99□□□□□ -0.97
COL4A6-204ENST00000461897 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 MUSTN1Q8IVN3 82 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 CLUHP3Q96NS8 147 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 BEAN1Q3B7T3 259 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 RNF183Q96D59 192 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 ERG28Q9UKR5 140 aa8.98□□□□□ -0.97
COL4A6-204ENST00000461897 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 TINCRA0A1B0GVN0 87 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 STHQ8IWL8 128 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 WFDC10AQ9H1F0 79 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 C19orf73Q9NVV2 129 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
COL4A6-204ENST00000461897 A0A1B0GV72 72 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 ZNF415Q09FC8 603 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 DNAJC30Q96LL9 226 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 FAM110AQ9BQ89 295 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 TIMM21Q9BVV7 248 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 TNFRSF18Q9Y5U5 241 aa8.96□□□□□ -0.97
COL4A6-204ENST00000461897 TRBV30A0A0K0K1B3 111 aa8.96□□□□□ -0.98
COL4A6-204ENST00000461897 FBN1P35555 2871 aaKnown RBP8.95□□□□□ -0.98
COL4A6-204ENST00000461897 SLC25A20O43772 301 aa8.95□□□□□ -0.98
COL4A6-204ENST00000461897 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
COL4A6-204ENST00000461897 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
COL4A6-204ENST00000461897 INSP01308 110 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 IGHV3-53P01767 116 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 PRM2P04554 102 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 Q6ZUT4 128 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 C11orf72Q8NBR9 251 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 VSIG2Q96IQ7 327 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 SPXQ9BT56 116 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 NACAE9PAV3 2078 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 IGHV3-64A0A075B6Q5 118 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 TMEM262E9PQX1 116 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 TIMM17BO60830 172 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 CMC4P56277 68 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-204ENST00000461897 KRTAP24-1Q3LI83 254 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 XCL2Q9UBD3 114 aa8.94□□□□□ -0.98
COL4A6-204ENST00000461897 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
COL4A6-204ENST00000461897 HTN1P15515 57 aa8.93□□□□□ -0.98
COL4A6-204ENST00000461897 ATXN8Q156A1 80 aa8.93□□□□□ -0.98
COL4A6-204ENST00000461897 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
COL4A6-204ENST00000461897 RS1O15537 224 aa8.92□□□□□ -0.98
COL4A6-204ENST00000461897 MIAQ16674 131 aa8.92□□□□□ -0.98
COL4A6-204ENST00000461897 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
COL4A6-204ENST00000461897 Q6ZSN1 163 aa8.92□□□□□ -0.98
COL4A6-204ENST00000461897 CMYA5Q8N3K9 4069 aa8.92□□□□□ -0.98
COL4A6-204ENST00000461897 C9JAW5 83 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 SPINK8P0C7L1 97 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 XGP55808 180 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 TIRAPP58753 221 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 LINC01620Q4KN68 170 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 C1orf158Q8N1D5 194 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 NOTCH3Q9UM47 2321 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 IGHV3-73A0A0B4J1V6 119 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 MT-ATP8P03928 68 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 GIG44P09565 113 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-204ENST00000461897 RPL13AP40429 203 aaKnown RBP8.91□□□□□ -0.98
COL4A6-204ENST00000461897 C9orf66Q5T8R8 295 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 CEMP1Q6PRD7 247 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-204ENST00000461897 LINC01587Q99440 93 aa8.91□□□□□ -0.98
COL4A6-204ENST00000461897 IFITM1P13164 125 aa8.9□□□□□ -0.98
COL4A6-204ENST00000461897 ADAMTSL4-AS1Q5T5F5 129 aa8.9□□□□□ -0.98
COL4A6-204ENST00000461897 Q9UF83 564 aa8.9□□□□□ -0.98
COL4A6-204ENST00000461897 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
COL4A6-204ENST00000461897 TRIAP1O43715 76 aa8.89□□□□□ -0.99
COL4A6-204ENST00000461897 CKS1BP61024 79 aa8.89□□□□□ -0.99
COL4A6-204ENST00000461897 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
COL4A6-204ENST00000461897 RPL35AP18077 110 aaKnown RBP8.89□□□□□ -0.99
COL4A6-204ENST00000461897 PRIMA1Q86XR5 153 aa8.89□□□□□ -0.99
COL4A6-204ENST00000461897 IL17DQ8TAD2 202 aa8.89□□□□□ -0.99
COL4A6-204ENST00000461897 NDUFA1O15239 70 aa8.88□□□□□ -0.99
COL4A6-204ENST00000461897 Q1RN00 199 aa8.88□□□□□ -0.99
COL4A6-204ENST00000461897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-204ENST00000461897 IGHV3OR16-12A0A075B7B8 117 aa8.87□□□□□ -0.99
COL4A6-204ENST00000461897 IGKV2-29A2NJV5 120 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-204ENST00000461897 WFDC9Q8NEX5 89 aa8.87□□□□□ -0.99
COL4A6-204ENST00000461897 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
COL4A6-204ENST00000461897 IGLV5-39A0A0G2JS06 123 aa8.87□□□□□ -0.99
COL4A6-204ENST00000461897 H7C2G1 150 aa8.87□□□□□ -0.99
COL4A6-204ENST00000461897 RNASE13Q5GAN3 156 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms