RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SPANXDQ9BXN6 97 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 ATG5Q9H1Y0 275 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 KIAA0100Q14667 2235 aaKnown RBP0.86□□□□□ -2.27
HDAC6-212ENST00000461608 KIF20BQ96Q89 1820 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 ZNF609O15014 1411 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 EDC4Q6P2E9 1401 aaKnown RBP0.86□□□□□ -2.27
HDAC6-212ENST00000461608 TJP1Q07157 1748 aa0.86□□□□□ -2.27
HDAC6-212ENST00000461608 GOLGB1Q14789 3259 aaKnown RBP0.86□□□□□ -2.27
HDAC6-212ENST00000461608 LAMB4A4D0S4 1761 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 LAMB1P07942 1786 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 PAPPA2Q9BXP8 1791 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 HELZP42694 1942 aaKnown RBP0.85□□□□□ -2.27
HDAC6-212ENST00000461608 ATG2AQ2TAZ0 1938 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 FLG2Q5D862 2391 aaPredicted RBP0.85□□□□□ -2.27
HDAC6-212ENST00000461608 TNRC6AQ8NDV7 1962 aaKnown RBP0.85□□□□□ -2.27
HDAC6-212ENST00000461608 TRAV12-3A0A0B4J271 114 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 NUPR2A6NF83 97 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 TMEM262E9PQX1 116 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 IGHV3-33P01772 117 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 CCKP06307 115 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 GNG11P61952 73 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 SBSPONQ8IVN8 264 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 AMELYQ99218 206 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 DPY30Q9C005 99 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 C22orf24Q9Y442 160 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 AP4S1Q9Y587 144 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 KDM3BQ7LBC6 1761 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 PCNTO95613 3336 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 PSME4Q14997 1843 aa0.85□□□□□ -2.27
HDAC6-212ENST00000461608 SCN7AQ01118 1682 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 CACNA1BQ00975 2339 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 DDX60Q8IY21 1712 aaKnown RBP0.84□□□□□ -2.27
HDAC6-212ENST00000461608 MYH7P12883 1935 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 SIPA1L3O60292 1781 aaPredicted RBP0.84□□□□□ -2.27
HDAC6-212ENST00000461608 ANKRD36CQ5JPF3 1778 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 TRAV13-2A0A0B4J235 113 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 TEX49A0A1B0GTD5 131 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 UBE2L5PA0A1B0GUS4 154 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 LOC101927531A0A1B0GV80 90 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 hADV29S1A0JD25 119 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 JMJD7-PLA2G4BH0Y9G9 81 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 IGLV3-1P01715 115 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 UBE2L3P68036 154 aaKnown RBP0.84□□□□□ -2.27
HDAC6-212ENST00000461608 DCDP81605 110 aaKnown RBP0.84□□□□□ -2.27
HDAC6-212ENST00000461608 C12orf73Q69YU5 71 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 FAM213BQ8TBF2 198 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 LINC00312Q9Y6C7 94 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 V9GYS6 101 aa0.84□□□□□ -2.27
HDAC6-212ENST00000461608 KMT2BQ9UMN6 2715 aaPredicted RBP0.84□□□□□ -2.28
HDAC6-212ENST00000461608 FANCMQ8IYD8 2048 aa0.84□□□□□ -2.28
HDAC6-212ENST00000461608 MYH6P13533 1939 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 ALPK3Q96L96 1907 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 TRAV2A0A0B4J234 112 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 PIGBOS1A0A0B4J2F0 54 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 A0A0J9YY99 117 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 TRBV10-1A0A0K0K1A3 114 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 TRBV10-3A0A0K0K1G6 114 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 LINC00032P0C843 101 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 IGLC1P0CG04 106 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 FAUP35544 74 aaKnown RBP0.83□□□□□ -2.28
HDAC6-212ENST00000461608 FXYD4P59646 89 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 C10orf128Q5T292 105 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 SFTA2Q6UW10 78 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 COMMD6Q7Z4G1 85 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 DMAC1Q96GE9 116 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 PMCHL2Q9BQD1 86 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 PRO3102Q9H379 93 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 NPVFQ9HCQ7 196 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 FAIMQ9NVQ4 179 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 SCP2D1Q9UJQ7 156 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 MRC1P22897 1456 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 MYH13Q9UKX3 1938 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 LRRC37AA6NMS7 1700 aa0.83□□□□□ -2.28
HDAC6-212ENST00000461608 TNRC18O15417 2968 aaPredicted RBP0.83□□□□□ -2.28
HDAC6-212ENST00000461608 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 MYH1P12882 1939 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 HELZ2Q9BYK8 2649 aaKnown RBP0.82□□□□□ -2.28
HDAC6-212ENST00000461608 SSSCA1O60232 199 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 IGHV3-30P01768 117 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 IGHV3-30-5P0DP03 117 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 PDE6GP18545 87 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 SEC11AP67812 179 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 PYY3Q5JQD4 70 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 CYP2G1PQ6ZSU1 146 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 C20orf197Q8N268 126 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 MYOZ3Q8TDC0 251 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 MANBALQ9NQG1 85 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 SSC5DA1L4H1 1573 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 DUOX1Q9NRD9 1551 aa0.82□□□□□ -2.28
HDAC6-212ENST00000461608 NCOA6Q14686 2063 aaPredicted RBP0.82□□□□□ -2.28
HDAC6-212ENST00000461608 CEP290O15078 2479 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 CRYM-AS1A6NIL9 109 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 HIGD1CA8MV81 97 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 H3BQ15 152 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 NCR3O14931 201 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 SIX6O95475 246 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 FREM3P0C091 2139 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 UBE2D1P51668 147 aa0.81□□□□□ -2.28
HDAC6-212ENST00000461608 ATP5EP56381 51 aaPredicted RBP0.81□□□□□ -2.28
HDAC6-212ENST00000461608 RPL37AP61513 92 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms