RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 USP17L23D6RBM5 183 aa6.96□□□□□ -1.3
TRAPPC12-213ENST00000461577 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
TRAPPC12-213ENST00000461577 CARHSP1Q9Y2V2 147 aaKnown RBP6.96□□□□□ -1.3
TRAPPC12-213ENST00000461577 RHEBQ15382 184 aa6.95□□□□□ -1.3
TRAPPC12-213ENST00000461577 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
TRAPPC12-213ENST00000461577 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
TRAPPC12-213ENST00000461577 MAP1LC3AQ9H492 121 aa6.95□□□□□ -1.3
TRAPPC12-213ENST00000461577 RPS10P5Q9NQ39 176 aa6.95□□□□□ -1.3
TRAPPC12-213ENST00000461577 LAMTOR2Q9Y2Q5 125 aa6.95□□□□□ -1.3
TRAPPC12-213ENST00000461577 LOC389332A0A1B0GUA5 103 aa6.94□□□□□ -1.3
TRAPPC12-213ENST00000461577 GAGE12HA6NDE8 117 aa6.94□□□□□ -1.3
TRAPPC12-213ENST00000461577 RAB5AP20339 215 aa6.94□□□□□ -1.3
TRAPPC12-213ENST00000461577 NDUFA5Q16718 116 aa6.94□□□□□ -1.3
TRAPPC12-213ENST00000461577 ZNF664Q8N3J9 261 aa6.94□□□□□ -1.3
TRAPPC12-213ENST00000461577 CDC42SE2Q9NRR3 84 aa6.94□□□□□ -1.3
TRAPPC12-213ENST00000461577 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
TRAPPC12-213ENST00000461577 SS18Q15532 418 aa6.93□□□□□ -1.3
TRAPPC12-213ENST00000461577 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC12-213ENST00000461577 UBE2D4Q9Y2X8 147 aa6.93□□□□□ -1.3
TRAPPC12-213ENST00000461577 HERC2O95714 4834 aa6.93□□□□□ -1.3
TRAPPC12-213ENST00000461577 HSPG2P98160 4391 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 KIAA1109Q2LD37 5005 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 LINC00959A0A1B0GUT2 108 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 APOC3P02656 99 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 PRSS1P07477 247 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 COX19Q49B96 90 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
TRAPPC12-213ENST00000461577 RYR1P21817 5038 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 hDV102S1A0JD36 115 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 PRSS47A8MTI9 375 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 CCL25O15444 150 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 SNAPINO95295 136 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 XCL1P47992 114 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 RPL39P62891 51 aaKnown RBP6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 KIAA1644Q3SXP7 199 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 SVBPQ8N300 66 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 Q8N8P6 123 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 AP5S1Q9NUS5 200 aa6.91□□□□□ -1.3
TRAPPC12-213ENST00000461577 DNAH8Q96JB1 4490 aa6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 XGP55808 180 aa6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 Q6ZUT4 128 aa6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 GNB1LQ9BYB4 327 aa6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 SPANXA1Q9NS26 97 aa6.9□□□□□ -1.3
TRAPPC12-213ENST00000461577 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
TRAPPC12-213ENST00000461577 FOXI1Q12951 378 aa6.89□□□□□ -1.31
TRAPPC12-213ENST00000461577 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
TRAPPC12-213ENST00000461577 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 MT-ND6P03923 174 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 HAMPP81172 84 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 HIGD2BQ4VC39 106 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 Q8N1X5 172 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 C15orf56Q8N910 161 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
TRAPPC12-213ENST00000461577 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 IGHV1-58A0A0C4DH39 117 aa6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 K7EMI3 77 aa6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 CYSLTR1Q9Y271 337 aa6.87□□□□□ -1.31
TRAPPC12-213ENST00000461577 TGIF2-C20orf24A0A0A6YYL0 155 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 MALP21145 153 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 G0S2P27469 103 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 CNBPP62633 177 aaKnown RBP6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 Q6ZSA8 131 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 ALKBH7Q9BT30 221 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 PYGO1Q9Y3Y4 419 aa6.86□□□□□ -1.31
TRAPPC12-213ENST00000461577 IGHV3-64A0A075B6Q5 118 aa6.85□□□□□ -1.31
TRAPPC12-213ENST00000461577 COX7A2LO14548 114 aa6.85□□□□□ -1.31
TRAPPC12-213ENST00000461577 SMR3BP02814 79 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC12-213ENST00000461577 Q6ZN92 141 aa6.85□□□□□ -1.31
TRAPPC12-213ENST00000461577 TMEM141Q96I45 108 aa6.85□□□□□ -1.31
TRAPPC12-213ENST00000461577 TRAPPC1Q9Y5R8 145 aa6.85□□□□□ -1.31
TRAPPC12-213ENST00000461577 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 GVQW2A0A096LPI5 108 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 TEX43Q6ZNM6 134 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 SLC7A5P1Q8MH63 180 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 FAM104AQ969W3 186 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 SMCO4Q9NRQ5 59 aa6.84□□□□□ -1.31
TRAPPC12-213ENST00000461577 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
TRAPPC12-213ENST00000461577 APOMO95445 188 aa6.83□□□□□ -1.32
TRAPPC12-213ENST00000461577 SLPIP03973 132 aa6.83□□□□□ -1.32
TRAPPC12-213ENST00000461577 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms