RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 AMMECR1LQ6DCA0 310 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 ERASQ7Z444 233 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 FER1L6-AS1Q8NA97 138 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 INO80EQ8NBZ0 244 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-206ENST00000461574 STOML3Q8TAV4 291 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 ENKURQ8TC29 256 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 DIRC1Q969H9 104 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 CCDC32Q9BV29 185 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 NKX6-2Q9C056 277 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-206ENST00000461574 GFRA4Q9GZZ7 299 aa3.07□□□□□ -1.92
BRCA1-206ENST00000461574 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 TRAV1-1A0A0B4J248 108 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 SSNA1O43805 119 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 AKR1C3P42330 323 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 XCL1P47992 114 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 H2BFSP57053 126 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 EIF5AP63241 154 aaKnown RBP3.06□□□□□ -1.92
BRCA1-206ENST00000461574 SERF2P84101 59 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 GAGE2BQ13066 116 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 RNASEKQ6P5S7 137 aaKnown RBP3.06□□□□□ -1.92
BRCA1-206ENST00000461574 CHCHD10Q8WYQ3 142 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-206ENST00000461574 LINC00526Q96FQ7 95 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 PSMG3Q9BT73 122 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-206ENST00000461574 WFDC1Q9HC57 220 aa3.06□□□□□ -1.92
BRCA1-206ENST00000461574 IGLV1-50A0A075B6I6 118 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 IGHV1-58A0A0C4DH39 117 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 LOC107984640A0A0U1RRK4 108 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 M0QY20 66 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 SNAI2O43623 268 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 LTAP01374 205 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 CXCL1P09341 107 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 OR5AL1P0C617 328 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 ATP6V0CP27449 155 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 RPL13AP40429 203 aaKnown RBP3.05□□□□□ -1.92
BRCA1-206ENST00000461574 FHITP49789 147 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 SEC61GP60059 68 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 RPL18AQ02543 176 aaKnown RBP3.05□□□□□ -1.92
BRCA1-206ENST00000461574 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 RASL11AQ6T310 242 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 COX8CQ7Z4L0 72 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 ISOC2Q96AB3 205 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 PGLYRP4Q96LB8 373 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 TNFSF18Q9UNG2 199 aa3.05□□□□□ -1.92
BRCA1-206ENST00000461574 CTXND1A0A1B0GTU2 59 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 FAM74A7A6NL05 159 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 H0Y9J4 135 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 CCL25O15444 150 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 FGF6P10767 208 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 PHF5AQ7RTV0 110 aaKnown RBP3.04□□□□□ -1.92
BRCA1-206ENST00000461574 TSKUQ8WUA8 353 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 URB1-AS1Q96HZ7 61 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 BTF3L4Q96K17 158 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 NIT2Q9NQR4 276 aa3.04□□□□□ -1.92
BRCA1-206ENST00000461574 A0A087WZ39 114 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 MAP1LC3B2A6NCE7 125 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 INMT-MINDY4F8WBC2 141 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 VCYO14598 125 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 PFDN1O60925 122 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 TSPAN13O95857 204 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 APCSP02743 223 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 IGLV7-43P04211 117 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 TRGC1P0CF51 173 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 BCL2P10415 239 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 SS18Q15532 418 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-206ENST00000461574 C6orf226Q5I0X4 101 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 AKR1C8PQ5T2L2 129 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 EIF5AL1Q6IS14 154 aaKnown RBP3.03□□□□□ -1.92
BRCA1-206ENST00000461574 TMEM101Q96IK0 257 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 CAMK2N2Q96S95 79 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 TCEAL7Q9BRU2 100 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 MAP1LC3BQ9GZQ8 125 aa3.03□□□□□ -1.92
BRCA1-206ENST00000461574 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-206ENST00000461574 BORCS7-ASMTA0A0B4J1R7 106 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 A0A1W2PNN7 141 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 IGKV2-29A2NJV5 120 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-206ENST00000461574 APOMO95445 188 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 ZNF25P17030 456 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-206ENST00000461574 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 SNRPEP62304 92 aaKnown RBP3.02□□□□□ -1.93
BRCA1-206ENST00000461574 VAMP3Q15836 100 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 ZNF726P1Q15940 193 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 GAGE2EQ4V326 116 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 GAGE2AQ6NT46 116 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 BAGE2Q86Y30 109 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 OR2D3Q8NGH3 330 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 OR5A1Q8NGJ0 315 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 MED28Q9H204 178 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 GAGE2DQ9UEU5 116 aa3.02□□□□□ -1.93
BRCA1-206ENST00000461574 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 LINC00959A0A1B0GUT2 108 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 H7C423 109 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 NCR2O95944 276 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 NTF3P20783 257 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 DEFA1P59665 94 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 RPS20P60866 119 aaKnown RBP3.01□□□□□ -1.93
BRCA1-206ENST00000461574 HERV-K104P63124 156 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 UBE2BP63146 152 aa3.01□□□□□ -1.93
BRCA1-206ENST00000461574 COX7A2LO14548 114 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms