RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 CRPP02741 224 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 ANGP03950 147 aaKnown RBP4.54□□□□□ -1.68
NUP50-212ENST00000461194 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 RBX1P62877 108 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 GAGE6Q13070 117 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 COTL1Q14019 142 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 WFDC2Q14508 124 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 BAALCQ8WXS3 180 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 TMEM191AQ9H0A3 160 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 PRR34Q9NV39 138 aa4.54□□□□□ -1.68
NUP50-212ENST00000461194 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 TRBV6-5A0A0K0K1A5 114 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
NUP50-212ENST00000461194 RIGQ13278 110 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 ADIRFQ15847 76 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 MIAQ16674 131 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 SMIM29Q86T20 159 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 NUP35Q8NFH5 326 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
NUP50-212ENST00000461194 NAT8BQ9UHF3 227 aa4.53□□□□□ -1.68
NUP50-212ENST00000461194 PCLOQ9Y6V0 5065 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 LECT2O14960 151 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 NCR2O95944 276 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 RAB4AP20338 218 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 XGP55808 180 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 RAB14P61106 215 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 LINC00269Q8N2A0 174 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 C20orf203Q8NBC4 194 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 DEFB104AQ8WTQ1 72 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 MRAP2Q96G30 205 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
NUP50-212ENST00000461194 IGLV4-60A0A075B6I1 120 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 I3L3M4 83 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 UBE2L6O14933 153 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 GAS8-AS1O95177 125 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 REG3AQ06141 175 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 GAGE2BQ13066 116 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 GAGE2EQ4V326 116 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 CLPSL2Q6UWE3 100 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 AMN1Q8IY45 258 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 TMEM70Q9BUB7 260 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 GAGE2DQ9UEU5 116 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 FAT1Q14517 4588 aa4.51□□□□□ -1.69
NUP50-212ENST00000461194 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.5□□□□□ -1.69
NUP50-212ENST00000461194 TRAV8-4A0A0B4J246 113 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 A0A1B0GW15 77 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 H7C423 109 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 PPP1R17O96001 155 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 APCSP02743 223 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 PMCHP20382 165 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 RPS10P46783 165 aaKnown RBP4.5□□□□□ -1.69
NUP50-212ENST00000461194 POLR2KP53803 58 aaKnown RBP4.5□□□□□ -1.69
NUP50-212ENST00000461194 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 CLLU1Q5K131 121 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 ST20Q9HBF5 79 aa4.5□□□□□ -1.69
NUP50-212ENST00000461194 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 TRBV27A0A0K0K1C4 114 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 LINC00862A6NCI5 91 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 PPP1R2P9O14990 202 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 HLA-DQA1P01909 254 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 PRSS1P07477 247 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 ESDP10768 282 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 VPREB1P12018 145 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 LINC01547P58512 204 aaPredicted RBP4.49□□□□□ -1.69
NUP50-212ENST00000461194 PNRC1Q12796 327 aaPredicted RBP4.49□□□□□ -1.69
NUP50-212ENST00000461194 FAM104BQ5XKR9 115 aa4.49□□□□□ -1.69
NUP50-212ENST00000461194 IGLV10-54A0A075B6I4 117 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.48□□□□□ -1.69
NUP50-212ENST00000461194 A0A1B0GXF2 115 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 IGKV2-29A2NJV5 120 aaPredicted RBP4.48□□□□□ -1.69
NUP50-212ENST00000461194 SMKR1H3BMG3 65 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 TSHBP01222 138 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 S100A8P05109 93 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 FGF6P10767 208 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 ZNF25P17030 456 aaPredicted RBP4.48□□□□□ -1.69
NUP50-212ENST00000461194 HBBP68871 147 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 IFITM2Q01629 132 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 MRPL51Q4U2R6 128 aaKnown RBP4.48□□□□□ -1.69
NUP50-212ENST00000461194 AMMECR1LQ6DCA0 310 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 RNASEKQ6P5S7 137 aaKnown RBP4.48□□□□□ -1.69
NUP50-212ENST00000461194 Q6ZSA8 131 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 TMEM242Q9NWH2 141 aa4.48□□□□□ -1.69
NUP50-212ENST00000461194 TRBV24-1A0A075B6N3 115 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 A0A087WYN8 130 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 EPM2AB3EWF7 344 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 F8W036 122 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 CKS2P33552 79 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 LINC01620Q4KN68 170 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 MRPL54Q6P161 138 aaKnown RBP4.47□□□□□ -1.69
NUP50-212ENST00000461194 ATP5L2Q7Z4Y8 100 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 BTF3L4Q96K17 158 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 C20orf78Q9BR46 151 aa4.47□□□□□ -1.69
NUP50-212ENST00000461194 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 C7orf77A4D0Y5 90 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms