RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 WFDC2Q14508 124 aa12.17□□□□□ -0.46
DDR1-241ENST00000460944 DNAH5Q8TE73 4624 aa12.17□□□□□ -0.46
DDR1-241ENST00000460944 IGLV5-52A0A0A0MRZ9 124 aa12.16□□□□□ -0.46
DDR1-241ENST00000460944 C14orf177Q52M58 125 aa12.16□□□□□ -0.46
DDR1-241ENST00000460944 FUSP35637 526 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDR1-241ENST00000460944 GNB1LQ9BYB4 327 aa12.15□□□□□ -0.46
DDR1-241ENST00000460944 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
DDR1-241ENST00000460944 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
DDR1-241ENST00000460944 MT-ND6P03923 174 aa12.14□□□□□ -0.47
DDR1-241ENST00000460944 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
DDR1-241ENST00000460944 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
DDR1-241ENST00000460944 CDC42SE2Q9NRR3 84 aa12.13□□□□□ -0.47
DDR1-241ENST00000460944 UBE2D4Q9Y2X8 147 aa12.13□□□□□ -0.47
DDR1-241ENST00000460944 CSDC2Q9Y534 153 aaKnown RBP12.13□□□□□ -0.47
DDR1-241ENST00000460944 KIAA1109Q2LD37 5005 aa12.13□□□□□ -0.47
DDR1-241ENST00000460944 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.12□□□□□ -0.47
DDR1-241ENST00000460944 USP17L23D6RBM5 183 aa12.12□□□□□ -0.47
DDR1-241ENST00000460944 KRTAP26-1Q6PEX3 210 aa12.12□□□□□ -0.47
DDR1-241ENST00000460944 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
DDR1-241ENST00000460944 Q8N8P6 123 aa12.12□□□□□ -0.47
DDR1-241ENST00000460944 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
DDR1-241ENST00000460944 GCSHP23434 173 aa12.11□□□□□ -0.47
DDR1-241ENST00000460944 NXT2Q9NPJ8 142 aaKnown RBP12.11□□□□□ -0.47
DDR1-241ENST00000460944 TGIF2-C20orf24A0A0A6YYL0 155 aa12.1□□□□□ -0.47
DDR1-241ENST00000460944 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
DDR1-241ENST00000460944 CHCHD10Q8WYQ3 142 aaPredicted RBP12.1□□□□□ -0.47
DDR1-241ENST00000460944 MRPL18Q9H0U6 180 aaKnown RBP12.1□□□□□ -0.47
DDR1-241ENST00000460944 GAGE12HA6NDE8 117 aa12.09□□□□□ -0.47
DDR1-241ENST00000460944 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
DDR1-241ENST00000460944 FABP9Q0Z7S8 132 aa12.09□□□□□ -0.47
DDR1-241ENST00000460944 SS18Q15532 418 aa12.09□□□□□ -0.47
DDR1-241ENST00000460944 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
DDR1-241ENST00000460944 LINC00959A0A1B0GUT2 108 aa12.08□□□□□ -0.48
DDR1-241ENST00000460944 K7EMI3 77 aa12.08□□□□□ -0.48
DDR1-241ENST00000460944 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
DDR1-241ENST00000460944 RYR1P21817 5038 aa12.08□□□□□ -0.48
DDR1-241ENST00000460944 IFI27P40305 119 aaPredicted RBP12.07□□□□□ -0.48
DDR1-241ENST00000460944 Q6ZUT4 128 aa12.07□□□□□ -0.48
DDR1-241ENST00000460944 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
DDR1-241ENST00000460944 XCL1P47992 114 aa12.06□□□□□ -0.48
DDR1-241ENST00000460944 RNASE13Q5GAN3 156 aaKnown RBP12.06□□□□□ -0.48
DDR1-241ENST00000460944 ALKBH7Q9BT30 221 aaPredicted RBP12.06□□□□□ -0.48
DDR1-241ENST00000460944 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
DDR1-241ENST00000460944 CCL25O15444 150 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 CFAP161Q6P656 301 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 PRSS3P2Q8NHM4 247 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 KRTAP17-1Q9BYP8 105 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 CYSLTR1Q9Y271 337 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 HERC2O95714 4834 aa12.05□□□□□ -0.48
DDR1-241ENST00000460944 C1orf196B1AJZ1 125 aa12.04□□□□□ -0.48
DDR1-241ENST00000460944 G0S2P27469 103 aa12.04□□□□□ -0.48
DDR1-241ENST00000460944 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
DDR1-241ENST00000460944 C2orf66Q6UXQ4 117 aa12.04□□□□□ -0.48
DDR1-241ENST00000460944 TRAV13-1A0A0B4J241 112 aa12.03□□□□□ -0.48
DDR1-241ENST00000460944 PRSS1P07477 247 aa12.03□□□□□ -0.48
DDR1-241ENST00000460944 SMCO4Q9NRQ5 59 aa12.03□□□□□ -0.48
DDR1-241ENST00000460944 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
DDR1-241ENST00000460944 hDV102S1A0JD36 115 aa12.02□□□□□ -0.49
DDR1-241ENST00000460944 FOXI1Q12951 378 aa12.02□□□□□ -0.49
DDR1-241ENST00000460944 CD164L2Q6UWJ8 174 aa12.02□□□□□ -0.49
DDR1-241ENST00000460944 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
DDR1-241ENST00000460944 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
DDR1-241ENST00000460944 APOBP04114 4563 aaKnown RBP12.01□□□□□ -0.49
DDR1-241ENST00000460944 IFITM10A6NMD0 228 aa12□□□□□ -0.49
DDR1-241ENST00000460944 FA2HQ7L5A8 372 aa12□□□□□ -0.49
DDR1-241ENST00000460944 OPRPNQ99935 248 aaPredicted RBP12□□□□□ -0.49
DDR1-241ENST00000460944 Q6ZN92 141 aa11.99□□□□□ -0.49
DDR1-241ENST00000460944 C15orf56Q8N910 161 aa11.99□□□□□ -0.49
DDR1-241ENST00000460944 TMEM141Q96I45 108 aa11.99□□□□□ -0.49
DDR1-241ENST00000460944 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
DDR1-241ENST00000460944 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
DDR1-241ENST00000460944 TEX43Q6ZNM6 134 aa11.98□□□□□ -0.49
DDR1-241ENST00000460944 FAM104AQ969W3 186 aa11.98□□□□□ -0.49
DDR1-241ENST00000460944 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.97□□□□□ -0.49
DDR1-241ENST00000460944 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 COX7A2LO14548 114 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 NPSP0C0P6 89 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 MALP21145 153 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 LINC01620Q4KN68 170 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
DDR1-241ENST00000460944 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
DDR1-241ENST00000460944 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
DDR1-241ENST00000460944 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
DDR1-241ENST00000460944 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
DDR1-241ENST00000460944 GVQW2A0A096LPI5 108 aaPredicted RBP11.95□□□□□ -0.5
DDR1-241ENST00000460944 LINC01546A6NGU7 62 aa11.95□□□□□ -0.5
DDR1-241ENST00000460944 VCX2Q9H322 139 aa11.95□□□□□ -0.5
DDR1-241ENST00000460944 HSPG2P98160 4391 aa11.95□□□□□ -0.5
DDR1-241ENST00000460944 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
DDR1-241ENST00000460944 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
DDR1-241ENST00000460944 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
DDR1-241ENST00000460944 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
DDR1-241ENST00000460944 APOMO95445 188 aa11.93□□□□□ -0.5
DDR1-241ENST00000460944 C5orf38Q86SI9 138 aa11.93□□□□□ -0.5
DDR1-241ENST00000460944 SCGB3A1Q96QR1 104 aa11.93□□□□□ -0.5
DDR1-241ENST00000460944 XGP55808 180 aa11.92□□□□□ -0.5
DDR1-241ENST00000460944 RAB5BP61020 215 aa11.92□□□□□ -0.5
DDR1-241ENST00000460944 ERASQ7Z444 233 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms