RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 UBE2D4Q9Y2X8 147 aa9.29□□□□□ -0.92
HDLBP-229ENST00000460826 IGLV10-54A0A075B6I4 117 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 IGKV3OR2-268A0A0C4DH90 116 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 RAB5AP20339 215 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 KRTAP26-1Q6PEX3 210 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
HDLBP-229ENST00000460826 FAM104AQ969W3 186 aa9.27□□□□□ -0.93
HDLBP-229ENST00000460826 NXT2Q9NPJ8 142 aaKnown RBP9.27□□□□□ -0.93
HDLBP-229ENST00000460826 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.93
HDLBP-229ENST00000460826 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
HDLBP-229ENST00000460826 LECT2O14960 151 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDLBP-229ENST00000460826 KRTAP10-2P60368 255 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 RNASE13Q5GAN3 156 aaKnown RBP9.26□□□□□ -0.93
HDLBP-229ENST00000460826 Q6ZUT4 128 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 BAALCQ8WXS3 180 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 TMEM18Q96B42 140 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 TIMM21Q9BVV7 248 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 COX11Q9Y6N1 276 aa9.26□□□□□ -0.93
HDLBP-229ENST00000460826 COLCA2A8K830 154 aa9.25□□□□□ -0.93
HDLBP-229ENST00000460826 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
HDLBP-229ENST00000460826 SPATA12Q7Z6I5 190 aa9.25□□□□□ -0.93
HDLBP-229ENST00000460826 ZNF664Q8N3J9 261 aa9.25□□□□□ -0.93
HDLBP-229ENST00000460826 PRSS3P2Q8NHM4 247 aa9.25□□□□□ -0.93
HDLBP-229ENST00000460826 C18orf32Q8TCD1 76 aa9.25□□□□□ -0.93
HDLBP-229ENST00000460826 OPRPNQ99935 248 aaPredicted RBP9.25□□□□□ -0.93
HDLBP-229ENST00000460826 CSDC2Q9Y534 153 aaKnown RBP9.25□□□□□ -0.93
HDLBP-229ENST00000460826 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
HDLBP-229ENST00000460826 ORMDL2Q53FV1 153 aa9.24□□□□□ -0.93
HDLBP-229ENST00000460826 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
HDLBP-229ENST00000460826 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
HDLBP-229ENST00000460826 K7EMI3 77 aa9.23□□□□□ -0.93
HDLBP-229ENST00000460826 SMAGPQ0VAQ4 97 aa9.23□□□□□ -0.93
HDLBP-229ENST00000460826 URB1-AS1Q96HZ7 61 aa9.23□□□□□ -0.93
HDLBP-229ENST00000460826 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
HDLBP-229ENST00000460826 LINC00959A0A1B0GUT2 108 aa9.22□□□□□ -0.93
HDLBP-229ENST00000460826 EREGO14944 169 aa9.22□□□□□ -0.93
HDLBP-229ENST00000460826 Q8N814 137 aa9.22□□□□□ -0.93
HDLBP-229ENST00000460826 CHCHD10Q8WYQ3 142 aaPredicted RBP9.22□□□□□ -0.93
HDLBP-229ENST00000460826 CYSLTR1Q9Y271 337 aa9.22□□□□□ -0.93
HDLBP-229ENST00000460826 GAGE12HA6NDE8 117 aa9.21□□□□□ -0.94
HDLBP-229ENST00000460826 ATP6V1G1O75348 118 aa9.21□□□□□ -0.94
HDLBP-229ENST00000460826 TRGC2P03986 189 aa9.21□□□□□ -0.94
HDLBP-229ENST00000460826 MRPS36P82909 103 aaKnown RBP9.21□□□□□ -0.94
HDLBP-229ENST00000460826 FA2HQ7L5A8 372 aa9.21□□□□□ -0.94
HDLBP-229ENST00000460826 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.94
HDLBP-229ENST00000460826 DNAH8Q96JB1 4490 aa9.2□□□□□ -0.94
HDLBP-229ENST00000460826 IGLV4-3A0A075B6K6 122 aa9.2□□□□□ -0.94
HDLBP-229ENST00000460826 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
HDLBP-229ENST00000460826 CCL25O15444 150 aa9.2□□□□□ -0.94
HDLBP-229ENST00000460826 TRAV13-1A0A0B4J241 112 aa9.19□□□□□ -0.94
HDLBP-229ENST00000460826 XCL1P47992 114 aa9.19□□□□□ -0.94
HDLBP-229ENST00000460826 ZC2HC1BQ5TFG8 222 aa9.19□□□□□ -0.94
HDLBP-229ENST00000460826 TOMM6Q96B49 74 aa9.19□□□□□ -0.94
HDLBP-229ENST00000460826 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
HDLBP-229ENST00000460826 FOXI1Q12951 378 aa9.18□□□□□ -0.94
HDLBP-229ENST00000460826 SS18Q15532 418 aa9.18□□□□□ -0.94
HDLBP-229ENST00000460826 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
HDLBP-229ENST00000460826 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.17□□□□□ -0.94
HDLBP-229ENST00000460826 A0A096LNJ9 63 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 C16orf90A8MZG2 172 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 LINC00614P0C842 121 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 LINC00173Q6ZV60 143 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 AP5S1Q9NUS5 200 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 PGPEP1Q9NXJ5 209 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 KIAA1109Q2LD37 5005 aa9.17□□□□□ -0.94
HDLBP-229ENST00000460826 IFITM10A6NMD0 228 aa9.16□□□□□ -0.94
HDLBP-229ENST00000460826 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
HDLBP-229ENST00000460826 PRSS1P07477 247 aa9.16□□□□□ -0.94
HDLBP-229ENST00000460826 S100A1P23297 94 aa9.16□□□□□ -0.94
HDLBP-229ENST00000460826 IGLV5-52A0A0A0MRZ9 124 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 G0S2P27469 103 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 PMCHL1Q16048 86 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 C15orf56Q8N910 161 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 NTN5Q8WTR8 489 aaPredicted RBP9.15□□□□□ -0.94
HDLBP-229ENST00000460826 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 AMELXQ99217 191 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 TIMM17AQ99595 171 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 RYR1P21817 5038 aa9.15□□□□□ -0.94
HDLBP-229ENST00000460826 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
HDLBP-229ENST00000460826 TEX43Q6ZNM6 134 aa9.14□□□□□ -0.95
HDLBP-229ENST00000460826 ERASQ7Z444 233 aa9.14□□□□□ -0.95
HDLBP-229ENST00000460826 NPSP0C0P6 89 aa9.13□□□□□ -0.95
HDLBP-229ENST00000460826 RAB5BP61020 215 aa9.13□□□□□ -0.95
HDLBP-229ENST00000460826 C14orf177Q52M58 125 aa9.13□□□□□ -0.95
HDLBP-229ENST00000460826 VCX2Q9H322 139 aa9.13□□□□□ -0.95
HDLBP-229ENST00000460826 HBDP02042 147 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 UBE2D1P51668 147 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 LINC00310P59036 64 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 LINC00242Q5T6M2 205 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 Q6ZN92 141 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 C5orf38Q86SI9 138 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 BAGE3Q86Y29 109 aa9.12□□□□□ -0.95
HDLBP-229ENST00000460826 hDV102S1A0JD36 115 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms