RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
ERCC3-205ENST00000460485 LYRM9A8MSI8 78 aa10.06□□□□□ -0.8
ERCC3-205ENST00000460485 J3QQQ9 107 aa10.06□□□□□ -0.8
ERCC3-205ENST00000460485 PRM2P04554 102 aa10.06□□□□□ -0.8
ERCC3-205ENST00000460485 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
ERCC3-205ENST00000460485 PTTG1IPP53801 180 aa10.06□□□□□ -0.8
ERCC3-205ENST00000460485 DGAT2L7PQ6IED9 249 aa10.06□□□□□ -0.8
ERCC3-205ENST00000460485 TIRAPP58753 221 aa10.05□□□□□ -0.8
ERCC3-205ENST00000460485 VAMP3Q15836 100 aa10.05□□□□□ -0.8
ERCC3-205ENST00000460485 GTF2H5Q6ZYL4 71 aa10.05□□□□□ -0.8
ERCC3-205ENST00000460485 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
ERCC3-205ENST00000460485 SLC25A29Q8N8R3 303 aa10.05□□□□□ -0.8
ERCC3-205ENST00000460485 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
ERCC3-205ENST00000460485 GAGE12BA1L429 117 aa10.04□□□□□ -0.8
ERCC3-205ENST00000460485 GAGE7O76087 117 aa10.04□□□□□ -0.8
ERCC3-205ENST00000460485 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
ERCC3-205ENST00000460485 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
ERCC3-205ENST00000460485 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
ERCC3-205ENST00000460485 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 IGLV5-45A0A087WSX0 123 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 HERVK_113P63121 156 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 SBSPONQ8IVN8 264 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
ERCC3-205ENST00000460485 A0A0J9YXV3 536 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 G3V4G9 280 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 UBE2L6O14933 153 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 LINC00694P0DN24 101 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 FXYD2P54710 66 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 MRAPQ8TCY5 172 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 PHLDA1Q8WV24 401 aaPredicted RBP10.02□□□□□ -0.81
ERCC3-205ENST00000460485 TMEM101Q96IK0 257 aa10.02□□□□□ -0.81
ERCC3-205ENST00000460485 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
ERCC3-205ENST00000460485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
ERCC3-205ENST00000460485 IGHV1-58A0A0C4DH39 117 aa10.01□□□□□ -0.81
ERCC3-205ENST00000460485 A0A0J9YY99 117 aa10.01□□□□□ -0.81
ERCC3-205ENST00000460485 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
ERCC3-205ENST00000460485 UBE2D1P51668 147 aa10.01□□□□□ -0.81
ERCC3-205ENST00000460485 Q6ZUT4 128 aa10.01□□□□□ -0.81
ERCC3-205ENST00000460485 Q6ZVH6 145 aa10.01□□□□□ -0.81
ERCC3-205ENST00000460485 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
ERCC3-205ENST00000460485 NOTCH3Q9UM47 2321 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 GAGE12JA6NER3 117 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 FABP2P12104 132 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 EMP1P54849 157 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 GAGE4Q13068 117 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 GAGE5Q13069 117 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
ERCC3-205ENST00000460485 FHL2Q14192 279 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 GAGE13Q4V321 117 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
ERCC3-205ENST00000460485 X6R8D5 127 aa10□□□□□ -0.81
ERCC3-205ENST00000460485 IGHV3-38A0A0C4DH36 116 aa9.99□□□□□ -0.81
ERCC3-205ENST00000460485 MIFP14174 115 aa9.99□□□□□ -0.81
ERCC3-205ENST00000460485 LYRM7Q5U5X0 104 aa9.99□□□□□ -0.81
ERCC3-205ENST00000460485 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
ERCC3-205ENST00000460485 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
ERCC3-205ENST00000460485 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
ERCC3-205ENST00000460485 PRB2P02812 416 aaPredicted RBP9.98□□□□□ -0.81
ERCC3-205ENST00000460485 DEFB104AQ8WTQ1 72 aa9.98□□□□□ -0.81
ERCC3-205ENST00000460485 VSIG2Q96IQ7 327 aa9.98□□□□□ -0.81
ERCC3-205ENST00000460485 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 K7EP34 96 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 TIMM17BO60830 172 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 Q9UF83 564 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
ERCC3-205ENST00000460485 COL7A1Q02388 2944 aa9.96□□□□□ -0.81
ERCC3-205ENST00000460485 H3BUT2 72 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 CCL25O15444 150 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 TSPEAR-AS2P59090 65 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 ZFAND6Q6FIF0 208 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 COPS9Q8WXC6 57 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 CDC42SE2Q9NRR3 84 aa9.96□□□□□ -0.82
ERCC3-205ENST00000460485 TRBV6-8A0A0A6YYG3 113 aa9.95□□□□□ -0.82
ERCC3-205ENST00000460485 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
ERCC3-205ENST00000460485 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
ERCC3-205ENST00000460485 SH2D6Q7Z4S9 175 aa9.95□□□□□ -0.82
ERCC3-205ENST00000460485 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
ERCC3-205ENST00000460485 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
ERCC3-205ENST00000460485 A8MZ25 164 aa9.94□□□□□ -0.82
ERCC3-205ENST00000460485 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
ERCC3-205ENST00000460485 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
ERCC3-205ENST00000460485 CEMP1Q6PRD7 247 aaPredicted RBP9.94□□□□□ -0.82
ERCC3-205ENST00000460485 RNF183Q96D59 192 aa9.94□□□□□ -0.82
ERCC3-205ENST00000460485 WWC2-AS2Q96NR7 200 aa9.94□□□□□ -0.82
ERCC3-205ENST00000460485 IGLV5-39A0A0G2JS06 123 aa9.93□□□□□ -0.82
ERCC3-205ENST00000460485 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
ERCC3-205ENST00000460485 RAB37Q96AX2 223 aa9.93□□□□□ -0.82
ERCC3-205ENST00000460485 SPANXDQ9BXN6 97 aa9.93□□□□□ -0.82
ERCC3-205ENST00000460485 PPDPFQ9H3Y8 114 aa9.93□□□□□ -0.82
ERCC3-205ENST00000460485 SPANXCQ9NY87 97 aa9.93□□□□□ -0.82
ERCC3-205ENST00000460485 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms