RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
LMNB1-203ENST00000460265 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
LMNB1-203ENST00000460265 CITED2Q99967 270 aaPredicted RBP11.35□□□□□ -0.59
LMNB1-203ENST00000460265 CCL24O00175 119 aa11.35□□□□□ -0.59
LMNB1-203ENST00000460265 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
LMNB1-203ENST00000460265 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
LMNB1-203ENST00000460265 SETXQ7Z333 2677 aaKnown RBP11.34□□□□□ -0.59
LMNB1-203ENST00000460265 ADARB2-AS1A8MUL3 147 aa11.34□□□□□ -0.59
LMNB1-203ENST00000460265 HERVK_113P63121 156 aa11.33□□□□□ -0.6
LMNB1-203ENST00000460265 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
LMNB1-203ENST00000460265 KLK5Q9Y337 293 aaPredicted RBP11.33□□□□□ -0.6
LMNB1-203ENST00000460265 TMEM89A2RUT3 159 aa11.33□□□□□ -0.6
LMNB1-203ENST00000460265 A0A0U1RRA0 63 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 FAM19A5Q7Z5A7 132 aaPredicted RBP11.32□□□□□ -0.6
LMNB1-203ENST00000460265 I3L3M4 83 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 INSP01308 110 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 J3KT08 172 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 J3QQQ9 107 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 NDUFA7O95182 113 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 MED14OSP0DP75 135 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 NPC2P61916 151 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 MUSTN1Q8IVN3 82 aa11.32□□□□□ -0.6
LMNB1-203ENST00000460265 TRGV2A0A075B6R0 118 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
LMNB1-203ENST00000460265 A0A096LNT2 108 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
LMNB1-203ENST00000460265 CRYGDP07320 174 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 COX6CP09669 75 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
LMNB1-203ENST00000460265 J3QKU1 62 aa11.3□□□□□ -0.6
LMNB1-203ENST00000460265 SMR3AQ99954 134 aa11.3□□□□□ -0.6
LMNB1-203ENST00000460265 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
LMNB1-203ENST00000460265 PF4P02776 101 aa11.3□□□□□ -0.6
LMNB1-203ENST00000460265 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
LMNB1-203ENST00000460265 DEFB114Q30KQ6 69 aa11.3□□□□□ -0.6
LMNB1-203ENST00000460265 M0QY20 66 aa11.3□□□□□ -0.6
LMNB1-203ENST00000460265 C3orf22Q8N5N4 141 aa11.29□□□□□ -0.6
LMNB1-203ENST00000460265 OR13C6PQ8NH95 151 aa11.29□□□□□ -0.6
LMNB1-203ENST00000460265 ZNF22P17026 224 aaPredicted RBP11.29□□□□□ -0.6
LMNB1-203ENST00000460265 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
LMNB1-203ENST00000460265 C4orf3Q8WVX3 66 aa11.29□□□□□ -0.6
LMNB1-203ENST00000460265 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
LMNB1-203ENST00000460265 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
LMNB1-203ENST00000460265 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
LMNB1-203ENST00000460265 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
LMNB1-203ENST00000460265 M0R2P5 195 aa11.28□□□□□ -0.6
LMNB1-203ENST00000460265 POLR2KP53803 58 aaKnown RBP11.28□□□□□ -0.6
LMNB1-203ENST00000460265 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
LMNB1-203ENST00000460265 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
LMNB1-203ENST00000460265 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
LMNB1-203ENST00000460265 Q9UF83 564 aa11.28□□□□□ -0.6
LMNB1-203ENST00000460265 UBR5O95071 2799 aaPredicted RBP11.27□□□□□ -0.6
LMNB1-203ENST00000460265 TRIAP1O43715 76 aa11.27□□□□□ -0.61
LMNB1-203ENST00000460265 GAGE2AQ6NT46 116 aa11.27□□□□□ -0.61
LMNB1-203ENST00000460265 LINC00315P59091 139 aa11.27□□□□□ -0.61
LMNB1-203ENST00000460265 KIF25-AS1Q9Y6Z4 181 aa11.27□□□□□ -0.61
LMNB1-203ENST00000460265 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 TRAV8-3A0A0A6YYJ7 113 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 UQCRQO14949 82 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 H7C423 109 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 LRRC75A-AS1Q8N1F1 130 aa11.26□□□□□ -0.61
LMNB1-203ENST00000460265 CLEC2BQ92478 149 aa11.25□□□□□ -0.61
LMNB1-203ENST00000460265 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
LMNB1-203ENST00000460265 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
LMNB1-203ENST00000460265 CR1P17927 2039 aa11.25□□□□□ -0.61
LMNB1-203ENST00000460265 A0A0B4J2C4 111 aa11.25□□□□□ -0.61
LMNB1-203ENST00000460265 ESM1Q9NQ30 184 aa11.25□□□□□ -0.61
LMNB1-203ENST00000460265 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
LMNB1-203ENST00000460265 TEP1Q99973 2627 aaKnown RBP11.25□□□□□ -0.61
LMNB1-203ENST00000460265 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
LMNB1-203ENST00000460265 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
LMNB1-203ENST00000460265 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
LMNB1-203ENST00000460265 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
LMNB1-203ENST00000460265 TRAV25A0A0B4J276 109 aa11.24□□□□□ -0.61
LMNB1-203ENST00000460265 TRBV7-7A0A0K0K1E9 115 aa11.23□□□□□ -0.61
LMNB1-203ENST00000460265 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
LMNB1-203ENST00000460265 H3BT86 120 aa11.23□□□□□ -0.61
LMNB1-203ENST00000460265 DEFB130BP0DP73 79 aa11.23□□□□□ -0.61
LMNB1-203ENST00000460265 DEFB130AP0DP74 79 aa11.23□□□□□ -0.61
LMNB1-203ENST00000460265 TRBV27A0A0K0K1C4 114 aa11.23□□□□□ -0.61
LMNB1-203ENST00000460265 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
LMNB1-203ENST00000460265 LINC01006Q8NI28 216 aa11.22□□□□□ -0.61
LMNB1-203ENST00000460265 TRBV30A0A0K0K1B3 111 aa11.22□□□□□ -0.61
LMNB1-203ENST00000460265 TSHBP01222 138 aa11.22□□□□□ -0.61
LMNB1-203ENST00000460265 ICOSQ9Y6W8 199 aa11.22□□□□□ -0.61
LMNB1-203ENST00000460265 TRGV4A0A0C4DH28 118 aa11.21□□□□□ -0.61
LMNB1-203ENST00000460265 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
LMNB1-203ENST00000460265 UBE2L6O14933 153 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 Q6ZSN1 163 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 FAM240AA0A1B0GVK7 77 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 Q6ZTI0 123 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 TIMM17AQ99595 171 aa11.21□□□□□ -0.62
LMNB1-203ENST00000460265 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms