RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
HDAC7-217ENST00000459625 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
HDAC7-217ENST00000459625 NLRC5Q86WI3 1866 aa11.94□□□□□ -0.5
HDAC7-217ENST00000459625 FSHBP01225 129 aa11.93□□□□□ -0.5
HDAC7-217ENST00000459625 PLA2G2AP14555 144 aa11.93□□□□□ -0.5
HDAC7-217ENST00000459625 K7EQG2 157 aa11.93□□□□□ -0.5
HDAC7-217ENST00000459625 LINC01006Q8NI28 216 aa11.93□□□□□ -0.5
HDAC7-217ENST00000459625 IGLV2-14P01704 120 aa11.93□□□□□ -0.5
HDAC7-217ENST00000459625 ANAPC1Q9H1A4 1944 aa11.93□□□□□ -0.5
HDAC7-217ENST00000459625 NOTCH4Q99466 2003 aa11.92□□□□□ -0.5
HDAC7-217ENST00000459625 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
HDAC7-217ENST00000459625 Q8N9L7 120 aa11.92□□□□□ -0.5
HDAC7-217ENST00000459625 MED12LQ86YW9 2145 aa11.91□□□□□ -0.5
HDAC7-217ENST00000459625 SERP2Q8N6R1 65 aa11.91□□□□□ -0.5
HDAC7-217ENST00000459625 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
HDAC7-217ENST00000459625 OTOGLQ3ZCN5 2332 aa11.91□□□□□ -0.5
HDAC7-217ENST00000459625 SIP14410 1827 aa11.91□□□□□ -0.5
HDAC7-217ENST00000459625 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
HDAC7-217ENST00000459625 ODF3BA8MYP8 253 aa11.9□□□□□ -0.5
HDAC7-217ENST00000459625 SPANXB1Q9NS25 103 aaPredicted RBP11.9□□□□□ -0.5
HDAC7-217ENST00000459625 A6NED7 52 aa11.9□□□□□ -0.5
HDAC7-217ENST00000459625 RBX1P62877 108 aa11.9□□□□□ -0.5
HDAC7-217ENST00000459625 H3BT86 120 aa11.89□□□□□ -0.51
HDAC7-217ENST00000459625 C10orf91Q5T1B1 145 aa11.89□□□□□ -0.51
HDAC7-217ENST00000459625 TANC1Q9C0D5 1861 aa11.89□□□□□ -0.51
HDAC7-217ENST00000459625 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
HDAC7-217ENST00000459625 ESRGQ1W209 222 aa11.88□□□□□ -0.51
HDAC7-217ENST00000459625 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
HDAC7-217ENST00000459625 Q6ZS46 218 aa11.88□□□□□ -0.51
HDAC7-217ENST00000459625 IGLV4-3A0A075B6K6 122 aa11.88□□□□□ -0.51
HDAC7-217ENST00000459625 IGLC6P0CF74 106 aa11.88□□□□□ -0.51
HDAC7-217ENST00000459625 Q6Q795 121 aa11.88□□□□□ -0.51
HDAC7-217ENST00000459625 FBXL19-AS1Q494R0 122 aa11.87□□□□□ -0.51
HDAC7-217ENST00000459625 ZNF106Q9H2Y7 1883 aaKnown RBP11.87□□□□□ -0.51
HDAC7-217ENST00000459625 M0QXV9 152 aa11.87□□□□□ -0.51
HDAC7-217ENST00000459625 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
HDAC7-217ENST00000459625 Q6ZQY7 126 aa11.87□□□□□ -0.51
HDAC7-217ENST00000459625 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
HDAC7-217ENST00000459625 OBSL1O75147 1896 aa11.87□□□□□ -0.51
HDAC7-217ENST00000459625 DENND4CQ5VZ89 1909 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 IGHV6-1A0A0B4J1U7 121 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 SORL1Q92673 2214 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 G3V4G9 280 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 H7C423 109 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 C1orf137Q5JT78 98 aa11.86□□□□□ -0.51
HDAC7-217ENST00000459625 MUC6Q6W4X9 2439 aa11.85□□□□□ -0.51
HDAC7-217ENST00000459625 M0R378 163 aa11.85□□□□□ -0.51
HDAC7-217ENST00000459625 TMEM223A0PJW6 202 aa11.85□□□□□ -0.51
HDAC7-217ENST00000459625 MRPL55Q7Z7F7 128 aaKnown RBP11.85□□□□□ -0.51
HDAC7-217ENST00000459625 DSCAMO60469 2012 aa11.84□□□□□ -0.51
HDAC7-217ENST00000459625 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
HDAC7-217ENST00000459625 NUP210Q8TEM1 1887 aaPredicted RBP11.84□□□□□ -0.51
HDAC7-217ENST00000459625 HIGD1BQ9P298 99 aa11.84□□□□□ -0.51
HDAC7-217ENST00000459625 TRBV6-4A0A1B0GX49 114 aa11.84□□□□□ -0.51
HDAC7-217ENST00000459625 LINC00643Q86TS7 51 aa11.84□□□□□ -0.51
HDAC7-217ENST00000459625 LELP1Q5T871 98 aa11.84□□□□□ -0.51
HDAC7-217ENST00000459625 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
HDAC7-217ENST00000459625 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
HDAC7-217ENST00000459625 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
HDAC7-217ENST00000459625 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
HDAC7-217ENST00000459625 C6orf223Q8N319 242 aa11.82□□□□□ -0.52
HDAC7-217ENST00000459625 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
HDAC7-217ENST00000459625 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
HDAC7-217ENST00000459625 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
HDAC7-217ENST00000459625 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-217ENST00000459625 TP73-AS1Q9UF72 201 aa11.81□□□□□ -0.52
HDAC7-217ENST00000459625 C2orf16Q68DN1 1984 aa11.81□□□□□ -0.52
HDAC7-217ENST00000459625 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
HDAC7-217ENST00000459625 RPL28P46779 137 aaKnown RBP11.8□□□□□ -0.52
HDAC7-217ENST00000459625 ODF3Q96PU9 254 aa11.8□□□□□ -0.52
HDAC7-217ENST00000459625 PRR14LQ5THK1 2151 aa11.8□□□□□ -0.52
HDAC7-217ENST00000459625 M0QY20 66 aa11.8□□□□□ -0.52
HDAC7-217ENST00000459625 TRIAP1O43715 76 aa11.8□□□□□ -0.52
HDAC7-217ENST00000459625 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
HDAC7-217ENST00000459625 KIAA1549Q9HCM3 1950 aa11.8□□□□□ -0.52
HDAC7-217ENST00000459625 C9orf116Q5BN46 136 aaPredicted RBP11.79□□□□□ -0.52
HDAC7-217ENST00000459625 Q6ZSR3 168 aa11.79□□□□□ -0.52
HDAC7-217ENST00000459625 TRBV27A0A0K0K1C4 114 aa11.79□□□□□ -0.52
HDAC7-217ENST00000459625 FAM240AA0A1B0GVK7 77 aa11.79□□□□□ -0.52
HDAC7-217ENST00000459625 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
HDAC7-217ENST00000459625 U3KQK5 164 aa11.78□□□□□ -0.52
HDAC7-217ENST00000459625 EDN2P20800 178 aa11.78□□□□□ -0.52
HDAC7-217ENST00000459625 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
HDAC7-217ENST00000459625 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
HDAC7-217ENST00000459625 KRTAP10-9P60411 292 aa11.78□□□□□ -0.52
HDAC7-217ENST00000459625 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.52
HDAC7-217ENST00000459625 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.52
HDAC7-217ENST00000459625 MT-ATP8P03928 68 aa11.77□□□□□ -0.52
HDAC7-217ENST00000459625 SPRY4Q9C004 299 aa11.77□□□□□ -0.53
HDAC7-217ENST00000459625 LINC00337Q8N6G1 96 aa11.76□□□□□ -0.53
HDAC7-217ENST00000459625 COL4A3Q01955 1670 aa11.76□□□□□ -0.53
HDAC7-217ENST00000459625 CYSRT1A8MQ03 144 aa11.76□□□□□ -0.53
HDAC7-217ENST00000459625 SMIM11BQ8TCY0 68 aa11.76□□□□□ -0.53
HDAC7-217ENST00000459625 PCOTHQ58A44 107 aa11.76□□□□□ -0.53
HDAC7-217ENST00000459625 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
HDAC7-217ENST00000459625 RNASE8Q8TDE3 154 aaKnown RBP11.75□□□□□ -0.53
HDAC7-217ENST00000459625 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
HDAC7-217ENST00000459625 PLXNB3Q9ULL4 1909 aa11.75□□□□□ -0.53
HDAC7-217ENST00000459625 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms