RNA–Protein interactions for RNA: ENST00000457788.5

COL11A2-205, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 5

Gene COL11A2, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-205ENST00000457788 PRAC2D3DTV9 90 aa12.36□□□□□ -0.43
COL11A2-205ENST00000457788 CXCL5P42830 114 aa12.36□□□□□ -0.43
COL11A2-205ENST00000457788 FAM19A5Q7Z5A7 132 aaPredicted RBP12.36□□□□□ -0.43
COL11A2-205ENST00000457788 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
COL11A2-205ENST00000457788 C20orf173Q96LM9 149 aa12.36□□□□□ -0.43
COL11A2-205ENST00000457788 AMELXQ99217 191 aa12.36□□□□□ -0.43
COL11A2-205ENST00000457788 FAM236AA0A1B0GUQ0 79 aa12.35□□□□□ -0.43
COL11A2-205ENST00000457788 FAM236BA0A1B0GV22 79 aa12.35□□□□□ -0.43
COL11A2-205ENST00000457788 J3QQQ9 107 aa12.35□□□□□ -0.43
COL11A2-205ENST00000457788 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 CRYGDP07320 174 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 Q1RN00 199 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 DYNLRB2Q8TF09 96 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 MRPL53Q96EL3 112 aaKnown RBP12.34□□□□□ -0.43
COL11A2-205ENST00000457788 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 CRYGAP11844 174 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 EMP1P54849 157 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 LINC00643Q86TS7 51 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
COL11A2-205ENST00000457788 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
COL11A2-205ENST00000457788 DPH3P1Q9H4G8 78 aa12.33□□□□□ -0.44
COL11A2-205ENST00000457788 TRGV11A0A075B6L2 103 aa12.33□□□□□ -0.44
COL11A2-205ENST00000457788 H7C423 109 aa12.33□□□□□ -0.44
COL11A2-205ENST00000457788 SORL1Q92673 2214 aa12.32□□□□□ -0.44
COL11A2-205ENST00000457788 LEPROTO15243 131 aa12.32□□□□□ -0.44
COL11A2-205ENST00000457788 TMEM61Q8N0U2 210 aa12.32□□□□□ -0.44
COL11A2-205ENST00000457788 PF4P02776 101 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 COX7CP15954 63 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 DEFB1P60022 68 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 DEFB114Q30KQ6 69 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 PRIMA1Q86XR5 153 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 K7EQG2 157 aa12.31□□□□□ -0.44
COL11A2-205ENST00000457788 IGIPA6NJ69 53 aa12.3□□□□□ -0.44
COL11A2-205ENST00000457788 ZNF876PQ49A33 203 aa12.3□□□□□ -0.44
COL11A2-205ENST00000457788 ZNF256Q9Y2P7 627 aaPredicted RBP12.3□□□□□ -0.44
COL11A2-205ENST00000457788 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
COL11A2-205ENST00000457788 TRIAP1O43715 76 aa12.3□□□□□ -0.44
COL11A2-205ENST00000457788 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
COL11A2-205ENST00000457788 TSPEAR-AS2P59090 65 aa12.3□□□□□ -0.44
COL11A2-205ENST00000457788 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
COL11A2-205ENST00000457788 F6UB75 175 aa12.29□□□□□ -0.44
COL11A2-205ENST00000457788 AGPAT4-IT1Q9H0P7 198 aa12.29□□□□□ -0.44
COL11A2-205ENST00000457788 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
COL11A2-205ENST00000457788 TMEM223A0PJW6 202 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 SDIM1Q6ZPB5 146 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 MUSTN1Q8IVN3 82 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 C11orf21Q9P2W6 132 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 LST1O00453 97 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 GAGE2AQ6NT46 116 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 C9orf47Q6ZRZ4 202 aa12.28□□□□□ -0.44
COL11A2-205ENST00000457788 LINC00482Q8N8I6 264 aa12.27□□□□□ -0.45
COL11A2-205ENST00000457788 VWFP04275 2813 aa12.27□□□□□ -0.45
COL11A2-205ENST00000457788 LOC107984640A0A0U1RRK4 108 aa12.26□□□□□ -0.45
COL11A2-205ENST00000457788 ATOX1O00244 68 aa12.26□□□□□ -0.45
COL11A2-205ENST00000457788 TMEM258P61165 79 aa12.26□□□□□ -0.45
COL11A2-205ENST00000457788 MRAPQ8TCY5 172 aa12.26□□□□□ -0.45
COL11A2-205ENST00000457788 TSHBP01222 138 aa12.26□□□□□ -0.45
COL11A2-205ENST00000457788 C5orf38Q86SI9 138 aa12.26□□□□□ -0.45
COL11A2-205ENST00000457788 H7C2G1 150 aa12.25□□□□□ -0.45
COL11A2-205ENST00000457788 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
COL11A2-205ENST00000457788 LINC00477Q96M19 166 aa12.24□□□□□ -0.45
COL11A2-205ENST00000457788 TP53TG1Q9Y2A0 90 aa12.24□□□□□ -0.45
COL11A2-205ENST00000457788 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
COL11A2-205ENST00000457788 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
COL11A2-205ENST00000457788 DEFB131AP59861 70 aa12.22□□□□□ -0.45
COL11A2-205ENST00000457788 HIST1H4AP62805 103 aaKnown RBP12.22□□□□□ -0.45
COL11A2-205ENST00000457788 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
COL11A2-205ENST00000457788 VCYO14598 125 aa12.22□□□□□ -0.45
COL11A2-205ENST00000457788 STAB1Q9NY15 2570 aa12.21□□□□□ -0.45
COL11A2-205ENST00000457788 TRACP01848 142 aa12.21□□□□□ -0.45
COL11A2-205ENST00000457788 SPATA3Q8NHX4 192 aa12.21□□□□□ -0.45
COL11A2-205ENST00000457788 NOTCH3Q9UM47 2321 aa12.21□□□□□ -0.46
COL11A2-205ENST00000457788 C2orf48Q96LS8 159 aa12.2□□□□□ -0.46
COL11A2-205ENST00000457788 MAP6D1Q9H9H5 199 aa12.2□□□□□ -0.46
COL11A2-205ENST00000457788 TRRAPQ9Y4A5 3859 aa12.2□□□□□ -0.46
COL11A2-205ENST00000457788 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
COL11A2-205ENST00000457788 ZNF22P17026 224 aaPredicted RBP12.19□□□□□ -0.46
COL11A2-205ENST00000457788 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
COL11A2-205ENST00000457788 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 PRR9Q5T870 116 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 CEMP1Q6PRD7 247 aaPredicted RBP12.18□□□□□ -0.46
COL11A2-205ENST00000457788 DAND5Q8N907 189 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 COL6A5A8TX70 2615 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 NXPH4O95158 308 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 APRG1Q8IVJ8 170 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 ZFAND2AQ8N6M9 145 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 FAM19A4Q96LR4 140 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
COL11A2-205ENST00000457788 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
COL11A2-205ENST00000457788 RHOHQ15669 191 aa12.17□□□□□ -0.46
COL11A2-205ENST00000457788 MGPP08493 103 aa12.16□□□□□ -0.46
COL11A2-205ENST00000457788 TRBV6-5A0A0K0K1A5 114 aa12.15□□□□□ -0.46
COL11A2-205ENST00000457788 S100A4P26447 101 aaKnown RBP12.15□□□□□ -0.46
COL11A2-205ENST00000457788 C9orf66Q5T8R8 295 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms