RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TRGV4A0A0C4DH28 118 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 TRBV7-7A0A0K0K1E9 115 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 A8MZ25 164 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 SMIM1B2RUZ4 78 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 H0YGX0 51 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 ZZEF1O43149 2961 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 DEFB113Q30KQ7 82 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q6ZSN1 163 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 LINC00643Q86TS7 51 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 DAND5Q8N907 189 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 IL17DQ8TAD2 202 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 FAM104AQ969W3 186 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 CDC42SE2Q9NRR3 84 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 DOPEY2Q9Y3R5 2298 aa2.4□□□□□ -2.03
HMGN1P18-201ENST00000457642 HRNRQ86YZ3 2850 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 A0A0U1RRA0 63 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 TRBV6-4A0A1B0GX49 114 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 A0A1W2PRX2 142 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 B5MCH6 92 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 CCL24O00175 119 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 BAALC-AS2P0C853 105 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 CXCL5P42830 114 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 LINC00158P58513 81 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 ODF3L2Q3SX64 289 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 HIST2H2BCQ6DN03 193 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 HIST2H2BDQ6DRA6 164 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 SHISA2Q6UWI4 295 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q6ZTI0 123 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 C18orf65Q6ZTR6 163 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 C11orf44Q8N8P7 122 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 MAPK1IP1LQ8NDC0 245 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 NRGNQ92686 78 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 ZNF625Q96I27 306 aaPredicted RBP2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q96MF0 132 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 FAM110AQ9BQ89 295 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 CHCHD5Q9BSY4 110 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 TMEM126AQ9H061 195 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 NOP10Q9NPE3 64 aaKnown RBP2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 TOMM7Q9P0U1 55 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 SS18L2Q9UHA2 77 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 BOD1L1Q8NFC6 3051 aa2.39□□□□□ -2.03
HMGN1P18-201ENST00000457642 NACAE9PAV3 2078 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 SPENQ96T58 3664 aaKnown RBP2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 DNAJC9-AS1A6NH13 148 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 IBA57-AS1B1ANH7 110 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 F5H768 121 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 CRLF1O75462 422 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 MALP21145 153 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 RPL28P46779 137 aaKnown RBP2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 COX6A2Q02221 97 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 SS18Q15532 418 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 S100A7L2Q5SY68 101 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 GAGE2AQ6NT46 116 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 CFAP161Q6P656 301 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q6ZSV7 163 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 C1orf158Q8N1D5 194 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 OR13C6PQ8NH95 151 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 CITED2Q99967 270 aaPredicted RBP2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 SND1-IT1Q9HBX3 110 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 ZFHX4Q86UP3 3567 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 ADGRG4Q8IZF6 3080 aa2.38□□□□□ -2.03
HMGN1P18-201ENST00000457642 DOPEY1Q5JWR5 2465 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 CSPG4Q6UVK1 2322 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 DMXL1Q9Y485 3027 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 BSNQ9UPA5 3926 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 TRBV6-8A0A0A6YYG3 113 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 FAM236AA0A1B0GUQ0 79 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 FAM236BA0A1B0GV22 79 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 A0A1B0GX51 115 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 CCDC179H3BU77 68 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 ATOX1O00244 68 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 PAX4O43316 350 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 PRM2P04554 102 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 LINC00694P0DN24 101 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 RPL35AP18077 110 aaKnown RBP2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 C6orf226Q5I0X4 101 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 SOSTDC1Q6X4U4 206 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 SVIPQ8NHG7 77 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 ORMDL1Q9P0S3 153 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q9UF83 564 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 CREBBPQ92793 2442 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 MUC3AQ02505 3323 aa2.37□□□□□ -2.03
HMGN1P18-201ENST00000457642 A0A087WZ39 114 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 SMIM9A6NGZ8 99 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 JMJD7-PLA2G4BH0Y9G9 81 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 H3BQ85 93 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 UQCRQO14949 82 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 RNASE1P07998 156 aaKnown RBP2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 NHLRC4P0CG21 123 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 ATP5EP2Q5VTU8 51 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q6JHZ5 121 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 NTM-AS1Q6ZSK4 140 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 Q8IZM0 81 aa2.36□□□□□ -2.03
HMGN1P18-201ENST00000457642 C3orf22Q8N5N4 141 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms