RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 TRAV8-4A0A0B4J246 113 aa13.74□□□□□ -0.21
FAM3A-217ENST00000457212 PRSS29PA6NIE9 313 aa13.74□□□□□ -0.21
FAM3A-217ENST00000457212 CDC42SE2Q9NRR3 84 aa13.74□□□□□ -0.21
FAM3A-217ENST00000457212 CYSLTR1Q9Y271 337 aa13.74□□□□□ -0.21
FAM3A-217ENST00000457212 DNAH10Q8IVF4 4471 aa13.73□□□□□ -0.21
FAM3A-217ENST00000457212 PSCAO43653 123 aa13.73□□□□□ -0.21
FAM3A-217ENST00000457212 RAB5BP61020 215 aa13.73□□□□□ -0.21
FAM3A-217ENST00000457212 CLPSL2Q6UWE3 100 aa13.73□□□□□ -0.21
FAM3A-217ENST00000457212 ZNF664Q8N3J9 261 aa13.73□□□□□ -0.21
FAM3A-217ENST00000457212 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
FAM3A-217ENST00000457212 IGKV2D-24A0A075B6R9 120 aa13.72□□□□□ -0.21
FAM3A-217ENST00000457212 C2orf66Q6UXQ4 117 aa13.72□□□□□ -0.21
FAM3A-217ENST00000457212 PYGO1Q9Y3Y4 419 aa13.72□□□□□ -0.21
FAM3A-217ENST00000457212 LINC01549A6NIU2 74 aa13.71□□□□□ -0.21
FAM3A-217ENST00000457212 LINC00614P0C842 121 aa13.71□□□□□ -0.21
FAM3A-217ENST00000457212 MRPS36P82909 103 aaKnown RBP13.71□□□□□ -0.21
FAM3A-217ENST00000457212 AP5S1Q9NUS5 200 aa13.71□□□□□ -0.21
FAM3A-217ENST00000457212 FRAS1Q86XX4 4008 aa13.7□□□□□ -0.22
FAM3A-217ENST00000457212 TNP2Q05952 138 aa13.7□□□□□ -0.22
FAM3A-217ENST00000457212 NPSP0C0P6 89 aa13.68□□□□□ -0.22
FAM3A-217ENST00000457212 Q6ZUT4 128 aa13.68□□□□□ -0.22
FAM3A-217ENST00000457212 TOMM6Q96B49 74 aa13.68□□□□□ -0.22
FAM3A-217ENST00000457212 URB1-AS1Q96HZ7 61 aa13.68□□□□□ -0.22
FAM3A-217ENST00000457212 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
FAM3A-217ENST00000457212 IGKV3OR2-268A0A0C4DH90 116 aa13.67□□□□□ -0.22
FAM3A-217ENST00000457212 IGLV10-54A0A075B6I4 117 aa13.66□□□□□ -0.22
FAM3A-217ENST00000457212 CCL25O15444 150 aa13.66□□□□□ -0.22
FAM3A-217ENST00000457212 CHCHD1Q96BP2 118 aaKnown RBP13.66□□□□□ -0.22
FAM3A-217ENST00000457212 LINC00959A0A1B0GUT2 108 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 IGIPA6NJ69 53 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 EREGO14944 169 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 SS18Q15532 418 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 KRTAP26-1Q6PEX3 210 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 FAM104AQ969W3 186 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 TMEM141Q96I45 108 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
FAM3A-217ENST00000457212 IGLV4-3A0A075B6K6 122 aa13.64□□□□□ -0.23
FAM3A-217ENST00000457212 A0A087WTM6 91 aa13.64□□□□□ -0.23
FAM3A-217ENST00000457212 BAGE3Q86Y29 109 aa13.64□□□□□ -0.23
FAM3A-217ENST00000457212 MAPKAPK5-AS1Q8N8E1 139 aa13.64□□□□□ -0.23
FAM3A-217ENST00000457212 OPRPNQ99935 248 aaPredicted RBP13.64□□□□□ -0.23
FAM3A-217ENST00000457212 LRCOL1A6NCL2 159 aa13.63□□□□□ -0.23
FAM3A-217ENST00000457212 RNASE13Q5GAN3 156 aaKnown RBP13.63□□□□□ -0.23
FAM3A-217ENST00000457212 PAPPA-AS1Q5QFB9 102 aa13.63□□□□□ -0.23
FAM3A-217ENST00000457212 Q6ZN92 141 aa13.63□□□□□ -0.23
FAM3A-217ENST00000457212 ERASQ7Z444 233 aa13.63□□□□□ -0.23
FAM3A-217ENST00000457212 CHCHD10Q8WYQ3 142 aaPredicted RBP13.63□□□□□ -0.23
FAM3A-217ENST00000457212 SCGB3A1Q96QR1 104 aa13.63□□□□□ -0.23
FAM3A-217ENST00000457212 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
FAM3A-217ENST00000457212 HBDP02042 147 aa13.62□□□□□ -0.23
FAM3A-217ENST00000457212 FAT2Q9NYQ8 4349 aa13.61□□□□□ -0.23
FAM3A-217ENST00000457212 A0A1B0GVY2 172 aa13.61□□□□□ -0.23
FAM3A-217ENST00000457212 TEX43Q6ZNM6 134 aa13.61□□□□□ -0.23
FAM3A-217ENST00000457212 BAALCQ8WXS3 180 aa13.61□□□□□ -0.23
FAM3A-217ENST00000457212 TRAV13-1A0A0B4J241 112 aa13.6□□□□□ -0.23
FAM3A-217ENST00000457212 GAGE12HA6NDE8 117 aa13.6□□□□□ -0.23
FAM3A-217ENST00000457212 IFITM10A6NMD0 228 aa13.6□□□□□ -0.23
FAM3A-217ENST00000457212 VCX2Q9H322 139 aa13.6□□□□□ -0.23
FAM3A-217ENST00000457212 A0A096LNJ9 63 aa13.59□□□□□ -0.23
FAM3A-217ENST00000457212 C2orf88Q9BSF0 95 aa13.59□□□□□ -0.23
FAM3A-217ENST00000457212 HSBP1O75506 76 aa13.58□□□□□ -0.24
FAM3A-217ENST00000457212 XCL1P47992 114 aa13.58□□□□□ -0.24
FAM3A-217ENST00000457212 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
FAM3A-217ENST00000457212 AMELXQ99217 191 aa13.58□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BKO60814 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BJP06899 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 PMCHL1Q16048 86 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
FAM3A-217ENST00000457212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.56□□□□□ -0.24
FAM3A-217ENST00000457212 FOXI1Q12951 378 aa13.56□□□□□ -0.24
FAM3A-217ENST00000457212 C14orf177Q52M58 125 aa13.56□□□□□ -0.24
FAM3A-217ENST00000457212 PDZD11Q5EBL8 140 aa13.56□□□□□ -0.24
FAM3A-217ENST00000457212 LINC00173Q6ZV60 143 aa13.56□□□□□ -0.24
FAM3A-217ENST00000457212 Q8N814 137 aa13.56□□□□□ -0.24
FAM3A-217ENST00000457212 LECT2O14960 151 aa13.55□□□□□ -0.24
FAM3A-217ENST00000457212 SERF1AO75920 110 aa13.55□□□□□ -0.24
FAM3A-217ENST00000457212 WFDC2Q14508 124 aa13.55□□□□□ -0.24
FAM3A-217ENST00000457212 USP17L23D6RBM5 183 aa13.54□□□□□ -0.24
FAM3A-217ENST00000457212 ATP5LO75964 103 aa13.54□□□□□ -0.24
FAM3A-217ENST00000457212 CFAP161Q6P656 301 aa13.54□□□□□ -0.24
FAM3A-217ENST00000457212 UBE2D1P51668 147 aa13.53□□□□□ -0.24
FAM3A-217ENST00000457212 LINC00310P59036 64 aa13.53□□□□□ -0.24
FAM3A-217ENST00000457212 SPATA12Q7Z6I5 190 aa13.53□□□□□ -0.24
FAM3A-217ENST00000457212 PGPEP1Q9NXJ5 209 aa13.53□□□□□ -0.24
FAM3A-217ENST00000457212 ZC2HC1BQ5TFG8 222 aa13.52□□□□□ -0.25
FAM3A-217ENST00000457212 NTN5Q8WTR8 489 aaPredicted RBP13.52□□□□□ -0.25
FAM3A-217ENST00000457212 PKD1P98161 4303 aa13.51□□□□□ -0.25
FAM3A-217ENST00000457212 COX7A2LO14548 114 aa13.51□□□□□ -0.25
FAM3A-217ENST00000457212 SEC11AP67812 179 aa13.51□□□□□ -0.25
FAM3A-217ENST00000457212 PMVKQ15126 192 aa13.51□□□□□ -0.25
FAM3A-217ENST00000457212 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
FAM3A-217ENST00000457212 CDPF1Q6NVV7 123 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms