RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 CSDC2Q9Y534 153 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-204ENST00000456957 NUPR1O60356 82 aa10.91□□□□□ -0.66
PKNOX1-204ENST00000456957 HSBP1O75506 76 aa10.91□□□□□ -0.66
PKNOX1-204ENST00000456957 HBDP02042 147 aa10.91□□□□□ -0.66
PKNOX1-204ENST00000456957 IBA57-AS1B1ANH7 110 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 DGAT2L7PQ6IED9 249 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 CLPSL2Q6UWE3 100 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 Q6ZUT4 128 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 FAM104AQ969W3 186 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 PYGO1Q9Y3Y4 419 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 RYR2Q92736 4967 aa10.9□□□□□ -0.66
PKNOX1-204ENST00000456957 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
PKNOX1-204ENST00000456957 NDUFA6P56556 154 aa10.89□□□□□ -0.67
PKNOX1-204ENST00000456957 RNASE13Q5GAN3 156 aaKnown RBP10.89□□□□□ -0.67
PKNOX1-204ENST00000456957 FAM19A2Q8N3H0 131 aa10.89□□□□□ -0.67
PKNOX1-204ENST00000456957 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
PKNOX1-204ENST00000456957 IGLV4-3A0A075B6K6 122 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 MRPS36P82909 103 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 REG3AQ06141 175 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 PDZD11Q5EBL8 140 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 ENHOQ6UWT2 76 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 UBE2WQ96B02 151 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 PRR34Q9NV39 138 aa10.88□□□□□ -0.67
PKNOX1-204ENST00000456957 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 CRPP02741 224 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 ERASQ7Z444 233 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 TIMM17AQ99595 171 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 Q9HAA7 133 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 KMT2AQ03164 3969 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 HYDINQ4G0P3 5121 aa10.87□□□□□ -0.67
PKNOX1-204ENST00000456957 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
PKNOX1-204ENST00000456957 NPSP0C0P6 89 aa10.85□□□□□ -0.67
PKNOX1-204ENST00000456957 TMEM141Q96I45 108 aa10.85□□□□□ -0.67
PKNOX1-204ENST00000456957 TRAV8-3A0A0A6YYJ7 113 aa10.84□□□□□ -0.67
PKNOX1-204ENST00000456957 MIAQ16674 131 aa10.84□□□□□ -0.67
PKNOX1-204ENST00000456957 ZC2HC1BQ5TFG8 222 aa10.84□□□□□ -0.67
PKNOX1-204ENST00000456957 LINC00173Q6ZV60 143 aa10.84□□□□□ -0.67
PKNOX1-204ENST00000456957 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
PKNOX1-204ENST00000456957 EPPK1P58107 5090 aaKnown RBP10.83□□□□□ -0.68
PKNOX1-204ENST00000456957 IGLV10-54A0A075B6I4 117 aa10.82□□□□□ -0.68
PKNOX1-204ENST00000456957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
PKNOX1-204ENST00000456957 Q6ZN92 141 aa10.82□□□□□ -0.68
PKNOX1-204ENST00000456957 TEX43Q6ZNM6 134 aa10.82□□□□□ -0.68
PKNOX1-204ENST00000456957 BAALCQ8WXS3 180 aa10.82□□□□□ -0.68
PKNOX1-204ENST00000456957 AMELXQ99217 191 aa10.82□□□□□ -0.68
PKNOX1-204ENST00000456957 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
PKNOX1-204ENST00000456957 IFITM10A6NMD0 228 aa10.81□□□□□ -0.68
PKNOX1-204ENST00000456957 ATP5LO75964 103 aa10.81□□□□□ -0.68
PKNOX1-204ENST00000456957 PAPPA-AS1Q5QFB9 102 aa10.81□□□□□ -0.68
PKNOX1-204ENST00000456957 C1orf134Q5TEV5 83 aa10.81□□□□□ -0.68
PKNOX1-204ENST00000456957 VCX2Q9H322 139 aa10.81□□□□□ -0.68
PKNOX1-204ENST00000456957 BIRC6Q9NR09 4857 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 IGKV2D-24A0A075B6R9 120 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 TRAV13-1A0A0B4J241 112 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 TRAV8-4A0A0B4J246 113 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 S100A6P06703 90 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 Q6ZRN7 208 aaPredicted RBP10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 NFE4Q86UQ8 179 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 RMI2Q96E14 147 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 C1orf43Q9BWL3 253 aa10.8□□□□□ -0.68
PKNOX1-204ENST00000456957 FABP4P15090 132 aa10.79□□□□□ -0.68
PKNOX1-204ENST00000456957 CHCHD10Q8WYQ3 142 aaPredicted RBP10.79□□□□□ -0.68
PKNOX1-204ENST00000456957 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
PKNOX1-204ENST00000456957 C2orf88Q9BSF0 95 aa10.79□□□□□ -0.68
PKNOX1-204ENST00000456957 SS18Q15532 418 aa10.78□□□□□ -0.68
PKNOX1-204ENST00000456957 KRTAP26-1Q6PEX3 210 aa10.78□□□□□ -0.68
PKNOX1-204ENST00000456957 CST9LQ9H4G1 147 aa10.78□□□□□ -0.68
PKNOX1-204ENST00000456957 RTL8CO15255 209 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 CCL25O15444 150 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 UBE2D1P51668 147 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 PMVKQ15126 192 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 HIST3H2BBQ8N257 126 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 TM2D2Q9BX73 214 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 HSPB8Q9UJY1 196 aa10.77□□□□□ -0.69
PKNOX1-204ENST00000456957 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
PKNOX1-204ENST00000456957 XCL1P47992 114 aa10.76□□□□□ -0.69
PKNOX1-204ENST00000456957 SNRPEP62304 92 aaKnown RBP10.76□□□□□ -0.69
PKNOX1-204ENST00000456957 TMA7Q9Y2S6 64 aaKnown RBP10.76□□□□□ -0.69
PKNOX1-204ENST00000456957 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
PKNOX1-204ENST00000456957 DNAH2Q9P225 4427 aa10.76□□□□□ -0.69
PKNOX1-204ENST00000456957 GAGE12HA6NDE8 117 aa10.75□□□□□ -0.69
PKNOX1-204ENST00000456957 C5orf52A6NGY3 159 aa10.75□□□□□ -0.69
PKNOX1-204ENST00000456957 PRSS1P07477 247 aa10.75□□□□□ -0.69
PKNOX1-204ENST00000456957 LINC00242Q5T6M2 205 aa10.75□□□□□ -0.69
PKNOX1-204ENST00000456957 MAPKAPK5-AS1Q8N8E1 139 aa10.75□□□□□ -0.69
PKNOX1-204ENST00000456957 PACRGQ96M98 296 aaPredicted RBP10.75□□□□□ -0.69
PKNOX1-204ENST00000456957 PSCAO43653 123 aa10.74□□□□□ -0.69
PKNOX1-204ENST00000456957 FOXI1Q12951 378 aa10.74□□□□□ -0.69
PKNOX1-204ENST00000456957 FAM19A3Q7Z5A8 133 aa10.74□□□□□ -0.69
PKNOX1-204ENST00000456957 A0A0J9YXV3 536 aa10.73□□□□□ -0.69
PKNOX1-204ENST00000456957 H0Y8G0 127 aa10.73□□□□□ -0.69
PKNOX1-204ENST00000456957 CD164L2Q6UWJ8 174 aa10.73□□□□□ -0.69
PKNOX1-204ENST00000456957 DNAH10Q8IVF4 4471 aa10.73□□□□□ -0.69
PKNOX1-204ENST00000456957 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms