RNA–Protein interactions for RNA: ENST00000456737.1

LINC00442-202, long intergenic non-protein coding RNA 442, humanhuman

TSL 1 (best) BASIC

Gene LINC00442, Length 2,063 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00442-202ENST00000456737 NIPBLQ6KC79 2804 aaeCLIP9.45□□□□□ -0.9
LINC00442-202ENST00000456737 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
LINC00442-202ENST00000456737 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
LINC00442-202ENST00000456737 ZNF22P17026 224 aaPredicted RBP9.45□□□□□ -0.9
LINC00442-202ENST00000456737 ZFAND2AQ8N6M9 145 aa9.45□□□□□ -0.9
LINC00442-202ENST00000456737 CITED2Q99967 270 aaPredicted RBP9.45□□□□□ -0.9
LINC00442-202ENST00000456737 ESM1Q9NQ30 184 aa9.45□□□□□ -0.9
LINC00442-202ENST00000456737 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
LINC00442-202ENST00000456737 U3KQE9 123 aa9.45□□□□□ -0.9
LINC00442-202ENST00000456737 PRR9Q5T870 116 aa9.44□□□□□ -0.9
LINC00442-202ENST00000456737 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
LINC00442-202ENST00000456737 COX7CP15954 63 aa9.44□□□□□ -0.9
LINC00442-202ENST00000456737 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
LINC00442-202ENST00000456737 BAHCC1Q9P281 2608 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 SORL1Q92673 2214 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 CRYGAP11844 174 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 LINC00315P59091 139 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 MIAQ16674 131 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 UBE2E2Q96LR5 201 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 Q6ZSV7 163 aa9.43□□□□□ -0.9
LINC00442-202ENST00000456737 TIMM17BO60830 172 aa9.42□□□□□ -0.9
LINC00442-202ENST00000456737 LY6G6DO95868 133 aa9.42□□□□□ -0.9
LINC00442-202ENST00000456737 RNASE3P12724 160 aaKnown RBP9.42□□□□□ -0.9
LINC00442-202ENST00000456737 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
LINC00442-202ENST00000456737 LITAFQ99732 161 aa9.42□□□□□ -0.9
LINC00442-202ENST00000456737 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
LINC00442-202ENST00000456737 ATOX1O00244 68 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 GAGE2AQ6NT46 116 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
LINC00442-202ENST00000456737 F8P00451 2351 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 C2CD3Q4AC94 2353 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 FN1P02751 2386 aaKnown RBP9.41□□□□□ -0.9
LINC00442-202ENST00000456737 PRSS2P07478 247 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 RNASE4P34096 147 aaKnown RBP9.41□□□□□ -0.9
LINC00442-202ENST00000456737 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
LINC00442-202ENST00000456737 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 TMEM61Q8N0U2 210 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 FAM19A4Q96LR4 140 aa9.41□□□□□ -0.9
LINC00442-202ENST00000456737 I3L3M4 83 aa9.4□□□□□ -0.9
LINC00442-202ENST00000456737 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.9
LINC00442-202ENST00000456737 C3orf56Q8N813 242 aa9.4□□□□□ -0.9
LINC00442-202ENST00000456737 DCANP1Q8TF63 244 aa9.4□□□□□ -0.9
LINC00442-202ENST00000456737 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.91
LINC00442-202ENST00000456737 RNASE1P07998 156 aaKnown RBP9.4□□□□□ -0.91
LINC00442-202ENST00000456737 DAND5Q8N907 189 aa9.4□□□□□ -0.91
LINC00442-202ENST00000456737 F5H697 171 aa9.39□□□□□ -0.91
LINC00442-202ENST00000456737 K7EMT4 169 aa9.39□□□□□ -0.91
LINC00442-202ENST00000456737 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
LINC00442-202ENST00000456737 CLEC2BQ92478 149 aa9.39□□□□□ -0.91
LINC00442-202ENST00000456737 TRAV8-3A0A0A6YYJ7 113 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 IGHV1-58A0A0C4DH39 117 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 INAFM2P0DMQ5 153 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 HILS1P60008 231 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 C20orf203Q8NBC4 194 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 RHPN1-AS1Q9BWJ2 59 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 JMJD1CQ15652 2540 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 TMEM258P61165 79 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 NDUFA12Q9UI09 145 aa9.38□□□□□ -0.91
LINC00442-202ENST00000456737 GNRH2O43555 120 aa9.37□□□□□ -0.91
LINC00442-202ENST00000456737 TRACP01848 142 aa9.37□□□□□ -0.91
LINC00442-202ENST00000456737 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
LINC00442-202ENST00000456737 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 HOXD3P31249 432 aaPredicted RBP9.36□□□□□ -0.91
LINC00442-202ENST00000456737 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
LINC00442-202ENST00000456737 RPL11P62913 178 aaKnown RBP9.36□□□□□ -0.91
LINC00442-202ENST00000456737 KHDC1LQ5JSQ8 128 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 CEMP1Q6PRD7 247 aaPredicted RBP9.36□□□□□ -0.91
LINC00442-202ENST00000456737 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 IGLV4-3A0A075B6K6 122 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 COX7A2LO14548 114 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 SYNJ2BPP57105 145 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 FAM222AQ5U5X8 452 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 C18orf65Q6ZTR6 163 aa9.36□□□□□ -0.91
LINC00442-202ENST00000456737 EDN2P20800 178 aa9.35□□□□□ -0.91
LINC00442-202ENST00000456737 DEFB136Q30KP8 78 aa9.35□□□□□ -0.91
LINC00442-202ENST00000456737 C4orf3Q8WVX3 66 aa9.35□□□□□ -0.91
LINC00442-202ENST00000456737 LINC01006Q8NI28 216 aa9.35□□□□□ -0.91
LINC00442-202ENST00000456737 C16orf95Q9H693 158 aa9.35□□□□□ -0.91
LINC00442-202ENST00000456737 INAFM1C9JVW0 142 aa9.34□□□□□ -0.91
LINC00442-202ENST00000456737 SOCS3O14543 225 aa9.34□□□□□ -0.91
LINC00442-202ENST00000456737 SPRY2O43597 315 aa9.34□□□□□ -0.91
LINC00442-202ENST00000456737 CIRBPQ14011 172 aaKnown RBP9.34□□□□□ -0.91
LINC00442-202ENST00000456737 C2orf48Q96LS8 159 aa9.34□□□□□ -0.91
LINC00442-202ENST00000456737 IGKV3-7A0A075B6H7 116 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 M0QY20 66 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 VSIG2Q96IQ7 327 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 TEP1Q99973 2627 aaKnown RBP9.33□□□□□ -0.92
LINC00442-202ENST00000456737 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 KLLNB2CW77 178 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
LINC00442-202ENST00000456737 ATRQ13535 2644 aa9.32□□□□□ -0.92
LINC00442-202ENST00000456737 A0A087WWL8 130 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms