RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 MIAQ16674 131 aa11.95□□□□□ -0.5
FAM239A-203ENST00000456563 C2orf66Q6UXQ4 117 aa11.95□□□□□ -0.5
FAM239A-203ENST00000456563 LINC00336Q6ZUF6 198 aa11.95□□□□□ -0.5
FAM239A-203ENST00000456563 RMI2Q96E14 147 aa11.95□□□□□ -0.5
FAM239A-203ENST00000456563 AP5S1Q9NUS5 200 aa11.95□□□□□ -0.5
FAM239A-203ENST00000456563 CLPSL2Q6UWE3 100 aa11.94□□□□□ -0.5
FAM239A-203ENST00000456563 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
FAM239A-203ENST00000456563 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
FAM239A-203ENST00000456563 PYGO1Q9Y3Y4 419 aa11.94□□□□□ -0.5
FAM239A-203ENST00000456563 DNAH10Q8IVF4 4471 aa11.93□□□□□ -0.5
FAM239A-203ENST00000456563 COX11Q9Y6N1 276 aa11.93□□□□□ -0.5
FAM239A-203ENST00000456563 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
FAM239A-203ENST00000456563 LINC01549A6NIU2 74 aa11.92□□□□□ -0.5
FAM239A-203ENST00000456563 MRPS36P82909 103 aaKnown RBP11.92□□□□□ -0.5
FAM239A-203ENST00000456563 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
FAM239A-203ENST00000456563 C1orf43Q9BWL3 253 aa11.92□□□□□ -0.5
FAM239A-203ENST00000456563 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
FAM239A-203ENST00000456563 Q6ZUT4 128 aa11.91□□□□□ -0.5
FAM239A-203ENST00000456563 FAM104AQ969W3 186 aa11.91□□□□□ -0.5
FAM239A-203ENST00000456563 DNAH17Q9UFH2 4485 aa11.91□□□□□ -0.5
FAM239A-203ENST00000456563 NPSP0C0P6 89 aa11.9□□□□□ -0.5
FAM239A-203ENST00000456563 CHCHD1Q96BP2 118 aaKnown RBP11.9□□□□□ -0.5
FAM239A-203ENST00000456563 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 IGIPA6NJ69 53 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 PSCAO43653 123 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 TNP2Q05952 138 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 BAGE3Q86Y29 109 aa11.89□□□□□ -0.51
FAM239A-203ENST00000456563 OPRPNQ99935 248 aaPredicted RBP11.89□□□□□ -0.51
FAM239A-203ENST00000456563 IGLV4-3A0A075B6K6 122 aa11.88□□□□□ -0.51
FAM239A-203ENST00000456563 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
FAM239A-203ENST00000456563 RNASE13Q5GAN3 156 aaKnown RBP11.88□□□□□ -0.51
FAM239A-203ENST00000456563 TIMM17AQ99595 171 aa11.88□□□□□ -0.51
FAM239A-203ENST00000456563 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
FAM239A-203ENST00000456563 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
FAM239A-203ENST00000456563 A0A096LNJ9 63 aa11.87□□□□□ -0.51
FAM239A-203ENST00000456563 ERASQ7Z444 233 aa11.87□□□□□ -0.51
FAM239A-203ENST00000456563 MAPKAPK5-AS1Q8N8E1 139 aa11.87□□□□□ -0.51
FAM239A-203ENST00000456563 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
FAM239A-203ENST00000456563 CCL25O15444 150 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BKO60814 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HBDP02042 147 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BJP06899 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BOP23527 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BBP33778 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BDP58876 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BCP62807 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST2H2BEQ16778 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BHQ93079 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 SCGB3A1Q96QR1 104 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BNQ99877 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 HIST1H2BMQ99879 126 aa11.86□□□□□ -0.51
FAM239A-203ENST00000456563 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
FAM239A-203ENST00000456563 SS18Q15532 418 aa11.85□□□□□ -0.51
FAM239A-203ENST00000456563 Q6ZN92 141 aa11.85□□□□□ -0.51
FAM239A-203ENST00000456563 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
FAM239A-203ENST00000456563 FAT2Q9NYQ8 4349 aa11.84□□□□□ -0.51
FAM239A-203ENST00000456563 LINC00310P59036 64 aa11.84□□□□□ -0.51
FAM239A-203ENST00000456563 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
FAM239A-203ENST00000456563 PAPPA-AS1Q5QFB9 102 aa11.84□□□□□ -0.51
FAM239A-203ENST00000456563 AMELXQ99217 191 aa11.84□□□□□ -0.51
FAM239A-203ENST00000456563 A0A087WTM6 91 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 TRAV13-1A0A0B4J241 112 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 C1orf196B1AJZ1 125 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 HSBP1O75506 76 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 SERF1AO75920 110 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 PDZD11Q5EBL8 140 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 TEX43Q6ZNM6 134 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 VCX2Q9H322 139 aa11.83□□□□□ -0.52
FAM239A-203ENST00000456563 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
FAM239A-203ENST00000456563 IFITM10A6NMD0 228 aa11.82□□□□□ -0.52
FAM239A-203ENST00000456563 LINC00173Q6ZV60 143 aa11.82□□□□□ -0.52
FAM239A-203ENST00000456563 BAALCQ8WXS3 180 aa11.81□□□□□ -0.52
FAM239A-203ENST00000456563 C2orf88Q9BSF0 95 aa11.81□□□□□ -0.52
FAM239A-203ENST00000456563 A0A1B0GVY2 172 aa11.8□□□□□ -0.52
FAM239A-203ENST00000456563 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
FAM239A-203ENST00000456563 EREGO14944 169 aa11.8□□□□□ -0.52
FAM239A-203ENST00000456563 NUPR1O60356 82 aa11.8□□□□□ -0.52
FAM239A-203ENST00000456563 XCL1P47992 114 aa11.8□□□□□ -0.52
FAM239A-203ENST00000456563 FOXI1Q12951 378 aa11.8□□□□□ -0.52
FAM239A-203ENST00000456563 CD164L2Q6UWJ8 174 aa11.8□□□□□ -0.52
FAM239A-203ENST00000456563 ATP5LO75964 103 aa11.79□□□□□ -0.52
FAM239A-203ENST00000456563 UBE2D1P51668 147 aa11.79□□□□□ -0.52
FAM239A-203ENST00000456563 WFDC2Q14508 124 aa11.79□□□□□ -0.52
FAM239A-203ENST00000456563 ZC2HC1BQ5TFG8 222 aa11.79□□□□□ -0.52
FAM239A-203ENST00000456563 FAM19A2Q8N3H0 131 aa11.79□□□□□ -0.52
FAM239A-203ENST00000456563 LECT2O14960 151 aa11.77□□□□□ -0.53
FAM239A-203ENST00000456563 COA6Q5JTJ3 125 aaKnown RBP11.77□□□□□ -0.53
FAM239A-203ENST00000456563 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
FAM239A-203ENST00000456563 PMVKQ15126 192 aa11.76□□□□□ -0.53
FAM239A-203ENST00000456563 LINC00242Q5T6M2 205 aa11.76□□□□□ -0.53
FAM239A-203ENST00000456563 FAM19A3Q7Z5A8 133 aa11.76□□□□□ -0.53
FAM239A-203ENST00000456563 Q8N814 137 aa11.76□□□□□ -0.53
FAM239A-203ENST00000456563 IGHV3OR16-9A0A0B4J2B5 98 aa11.75□□□□□ -0.53
FAM239A-203ENST00000456563 C14orf177Q52M58 125 aa11.75□□□□□ -0.53
FAM239A-203ENST00000456563 CST9LQ9H4G1 147 aa11.75□□□□□ -0.53
FAM239A-203ENST00000456563 CFAP161Q6P656 301 aa11.74□□□□□ -0.53
FAM239A-203ENST00000456563 IFI27L1Q96BM0 104 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms