RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 RASL11AQ6T310 242 aa7.44□□□□□ -1.22
LMCD1-206ENST00000456506 ATP5L2Q7Z4Y8 100 aa7.44□□□□□ -1.22
LMCD1-206ENST00000456506 NUP35Q8NFH5 326 aa7.44□□□□□ -1.22
LMCD1-206ENST00000456506 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
LMCD1-206ENST00000456506 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
LMCD1-206ENST00000456506 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
LMCD1-206ENST00000456506 A0A0J9YXV3 536 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 HIGD1CA8MV81 97 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 F2Z2F3 143 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 GZMBP10144 247 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 CTRLP40313 264 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 SSTP61278 116 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 COX6A2Q02221 97 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 PGLYRP4Q96LB8 373 aa7.43□□□□□ -1.22
LMCD1-206ENST00000456506 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 A0A1B0GW15 77 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 A0A1B0GXF2 115 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 RAB5AP20339 215 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 TMEM243Q9BU79 118 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
LMCD1-206ENST00000456506 SMIM17P0DL12 118 aa7.41□□□□□ -1.22
LMCD1-206ENST00000456506 FER1L6-AS1Q8NA97 138 aa7.41□□□□□ -1.22
LMCD1-206ENST00000456506 A0A1B0GUT8 65 aa7.4□□□□□ -1.22
LMCD1-206ENST00000456506 MGPP08493 103 aa7.4□□□□□ -1.22
LMCD1-206ENST00000456506 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
LMCD1-206ENST00000456506 C7orf33Q8WU49 177 aa7.4□□□□□ -1.22
LMCD1-206ENST00000456506 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
LMCD1-206ENST00000456506 GNB1LQ9BYB4 327 aa7.4□□□□□ -1.22
LMCD1-206ENST00000456506 A0A096LNI7 61 aa7.39□□□□□ -1.23
LMCD1-206ENST00000456506 GVQW2A0A096LPI5 108 aaPredicted RBP7.39□□□□□ -1.23
LMCD1-206ENST00000456506 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
LMCD1-206ENST00000456506 H7C1H1 209 aa7.39□□□□□ -1.23
LMCD1-206ENST00000456506 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
LMCD1-206ENST00000456506 CACNG7P62955 275 aa7.39□□□□□ -1.23
LMCD1-206ENST00000456506 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
LMCD1-206ENST00000456506 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
LMCD1-206ENST00000456506 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 MT-ND6P03923 174 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 S100A8P05109 93 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 RIGQ13278 110 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 MAJINQ3KP22 176 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 TMEM136Q6ZRR5 245 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 STPG4Q8N801 248 aa7.38□□□□□ -1.23
LMCD1-206ENST00000456506 HBBP68871 147 aa7.37□□□□□ -1.23
LMCD1-206ENST00000456506 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
LMCD1-206ENST00000456506 NTF3P20783 257 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 AMTP48728 403 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 FOXI1Q12951 378 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 CFAP161Q6P656 301 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 CHCHD10Q8WYQ3 142 aaPredicted RBP7.36□□□□□ -1.23
LMCD1-206ENST00000456506 BORCS7Q96B45 105 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 TPPP3Q9BW30 176 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
LMCD1-206ENST00000456506 COTL1Q14019 142 aa7.35□□□□□ -1.23
LMCD1-206ENST00000456506 MRPL54Q6P161 138 aaKnown RBP7.35□□□□□ -1.23
LMCD1-206ENST00000456506 TMEM191AQ9H0A3 160 aa7.35□□□□□ -1.23
LMCD1-206ENST00000456506 UBE2L6O14933 153 aa7.34□□□□□ -1.23
LMCD1-206ENST00000456506 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
LMCD1-206ENST00000456506 TRGC2P03986 189 aa7.34□□□□□ -1.23
LMCD1-206ENST00000456506 TRGC1P0CF51 173 aa7.34□□□□□ -1.23
LMCD1-206ENST00000456506 TRAPPC1Q9Y5R8 145 aa7.34□□□□□ -1.23
LMCD1-206ENST00000456506 IGKV3OR2-268A0A0C4DH90 116 aa7.33□□□□□ -1.24
LMCD1-206ENST00000456506 C1orf196B1AJZ1 125 aa7.33□□□□□ -1.24
LMCD1-206ENST00000456506 FAM104BQ5XKR9 115 aa7.33□□□□□ -1.24
LMCD1-206ENST00000456506 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
LMCD1-206ENST00000456506 MUC2Q02817 5179 aa7.32□□□□□ -1.24
LMCD1-206ENST00000456506 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
LMCD1-206ENST00000456506 CAMPP49913 170 aa7.32□□□□□ -1.24
LMCD1-206ENST00000456506 FABP9Q0Z7S8 132 aa7.32□□□□□ -1.24
LMCD1-206ENST00000456506 TWIST1Q15672 202 aa7.32□□□□□ -1.24
LMCD1-206ENST00000456506 RPL39LQ96EH5 51 aaKnown RBP7.32□□□□□ -1.24
LMCD1-206ENST00000456506 LINC00526Q96FQ7 95 aa7.32□□□□□ -1.24
LMCD1-206ENST00000456506 MRPL18Q9H0U6 180 aaKnown RBP7.32□□□□□ -1.24
LMCD1-206ENST00000456506 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
LMCD1-206ENST00000456506 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
LMCD1-206ENST00000456506 H7C423 109 aa7.31□□□□□ -1.24
LMCD1-206ENST00000456506 NCR2O95944 276 aa7.31□□□□□ -1.24
LMCD1-206ENST00000456506 APCSP02743 223 aa7.31□□□□□ -1.24
LMCD1-206ENST00000456506 FGF6P10767 208 aa7.31□□□□□ -1.24
LMCD1-206ENST00000456506 OR5A1Q8NGJ0 315 aa7.31□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BKO60814 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BJP06899 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 RAB4AP20338 218 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BOP23527 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BBP33778 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BDP58876 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 RAB5BP61020 215 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BCP62807 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST2H2BEQ16778 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 COA6Q5JTJ3 125 aaKnown RBP7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.3□□□□□ -1.24
LMCD1-206ENST00000456506 Q6ZRP5 223 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BHQ93079 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BNQ99877 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 HIST1H2BMQ99879 126 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 LINC00474Q9P2X8 69 aa7.3□□□□□ -1.24
LMCD1-206ENST00000456506 IGHV1-58A0A0C4DH39 117 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms