RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 DNAH11Q96DT5 4516 aa10.45□□□□□ -0.74
RBM39-219ENST00000453310 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
RBM39-219ENST00000453310 C18orf32Q8TCD1 76 aa10.45□□□□□ -0.74
RBM39-219ENST00000453310 TIMM21Q9BVV7 248 aa10.45□□□□□ -0.74
RBM39-219ENST00000453310 C1orf43Q9BWL3 253 aa10.45□□□□□ -0.74
RBM39-219ENST00000453310 CSDC2Q9Y534 153 aaKnown RBP10.45□□□□□ -0.74
RBM39-219ENST00000453310 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
RBM39-219ENST00000453310 PKD1P98161 4303 aa10.44□□□□□ -0.74
RBM39-219ENST00000453310 FA2HQ7L5A8 372 aa10.44□□□□□ -0.74
RBM39-219ENST00000453310 CDC42SE2Q9NRR3 84 aa10.44□□□□□ -0.74
RBM39-219ENST00000453310 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
RBM39-219ENST00000453310 HECTD4Q9Y4D8 3996 aa10.44□□□□□ -0.74
RBM39-219ENST00000453310 IGKV3OR2-268A0A0C4DH90 116 aa10.43□□□□□ -0.74
RBM39-219ENST00000453310 TRGC2P03986 189 aa10.43□□□□□ -0.74
RBM39-219ENST00000453310 Q6ZUT4 128 aa10.43□□□□□ -0.74
RBM39-219ENST00000453310 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
RBM39-219ENST00000453310 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
RBM39-219ENST00000453310 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
RBM39-219ENST00000453310 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
RBM39-219ENST00000453310 LINC01546A6NGU7 62 aa10.42□□□□□ -0.74
RBM39-219ENST00000453310 C2orf66Q6UXQ4 117 aa10.42□□□□□ -0.74
RBM39-219ENST00000453310 A0A1B0GVY2 172 aa10.41□□□□□ -0.74
RBM39-219ENST00000453310 G0S2P27469 103 aa10.41□□□□□ -0.74
RBM39-219ENST00000453310 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
RBM39-219ENST00000453310 A0A087WTM6 91 aa10.4□□□□□ -0.74
RBM39-219ENST00000453310 MRPS36P82909 103 aaKnown RBP10.4□□□□□ -0.74
RBM39-219ENST00000453310 KRTAP26-1Q6PEX3 210 aa10.4□□□□□ -0.74
RBM39-219ENST00000453310 MAPKAPK5-AS1Q8N8E1 139 aa10.4□□□□□ -0.74
RBM39-219ENST00000453310 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
RBM39-219ENST00000453310 AP5S1Q9NUS5 200 aa10.4□□□□□ -0.74
RBM39-219ENST00000453310 PYGO1Q9Y3Y4 419 aa10.4□□□□□ -0.74
RBM39-219ENST00000453310 LRCOL1A6NCL2 159 aa10.39□□□□□ -0.75
RBM39-219ENST00000453310 LINC00614P0C842 121 aa10.39□□□□□ -0.75
RBM39-219ENST00000453310 FAM104AQ969W3 186 aa10.39□□□□□ -0.75
RBM39-219ENST00000453310 OPRPNQ99935 248 aaPredicted RBP10.39□□□□□ -0.75
RBM39-219ENST00000453310 PKHD1P08F94 4074 aa10.38□□□□□ -0.75
RBM39-219ENST00000453310 EPPK1P58107 5090 aaKnown RBP10.38□□□□□ -0.75
RBM39-219ENST00000453310 IGLV4-3A0A075B6K6 122 aa10.38□□□□□ -0.75
RBM39-219ENST00000453310 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
RBM39-219ENST00000453310 EREGO14944 169 aa10.38□□□□□ -0.75
RBM39-219ENST00000453310 RAB5BP61020 215 aa10.38□□□□□ -0.75
RBM39-219ENST00000453310 TOMM6Q96B49 74 aa10.38□□□□□ -0.75
RBM39-219ENST00000453310 WFDC2Q14508 124 aa10.37□□□□□ -0.75
RBM39-219ENST00000453310 BAALCQ8WXS3 180 aa10.37□□□□□ -0.75
RBM39-219ENST00000453310 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
RBM39-219ENST00000453310 IGIPA6NJ69 53 aa10.36□□□□□ -0.75
RBM39-219ENST00000453310 LECT2O14960 151 aa10.36□□□□□ -0.75
RBM39-219ENST00000453310 SS18Q15532 418 aa10.36□□□□□ -0.75
RBM39-219ENST00000453310 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
RBM39-219ENST00000453310 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 GAGE12HA6NDE8 117 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 CCL25O15444 150 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 NPSP0C0P6 89 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 XCL1P47992 114 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 Q6ZN92 141 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 TIMM17AQ99595 171 aa10.35□□□□□ -0.75
RBM39-219ENST00000453310 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 DYNC1H1Q14204 4646 aaKnown RBP10.34□□□□□ -0.75
RBM39-219ENST00000453310 A0A096LNJ9 63 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 IFITM10A6NMD0 228 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 ERASQ7Z444 233 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 SPATA12Q7Z6I5 190 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 Q8N814 137 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 CHCHD1Q96BP2 118 aaKnown RBP10.34□□□□□ -0.75
RBM39-219ENST00000453310 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
RBM39-219ENST00000453310 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
RBM39-219ENST00000453310 HBDP02042 147 aa10.33□□□□□ -0.76
RBM39-219ENST00000453310 FOXI1Q12951 378 aa10.33□□□□□ -0.76
RBM39-219ENST00000453310 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
RBM39-219ENST00000453310 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
RBM39-219ENST00000453310 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 PAPPA-AS1Q5QFB9 102 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 LINC00173Q6ZV60 143 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 AMELXQ99217 191 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 C2orf88Q9BSF0 95 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 VCX2Q9H322 139 aa10.32□□□□□ -0.76
RBM39-219ENST00000453310 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
RBM39-219ENST00000453310 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
RBM39-219ENST00000453310 HSBP1O75506 76 aa10.29□□□□□ -0.76
RBM39-219ENST00000453310 SERF1AO75920 110 aa10.29□□□□□ -0.76
RBM39-219ENST00000453310 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
RBM39-219ENST00000453310 UBE2D1P51668 147 aa10.29□□□□□ -0.76
RBM39-219ENST00000453310 LINC00310P59036 64 aa10.29□□□□□ -0.76
RBM39-219ENST00000453310 PGPEP1Q9NXJ5 209 aa10.29□□□□□ -0.76
RBM39-219ENST00000453310 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.28□□□□□ -0.76
RBM39-219ENST00000453310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST1H2BKO60814 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST1H2BJP06899 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST1H2BOP23527 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST1H2BBP33778 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST1H2BDP58876 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST1H2BCP62807 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST2H2BEQ16778 126 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 PDZD11Q5EBL8 140 aa10.28□□□□□ -0.76
RBM39-219ENST00000453310 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.28□□□□□ -0.76
RBM39-219ENST00000453310 NTN5Q8WTR8 489 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms