RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 ENHOQ6UWT2 76 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 Q6ZRN7 208 aaPredicted RBP7.97□□□□□ -1.13
LINC00339-205ENST00000452322 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 Q9HAA7 133 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 CDC42SE2Q9NRR3 84 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 SPANXA1Q9NS26 97 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 AP5S1Q9NUS5 200 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 CYSLTR1Q9Y271 337 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 RTL8CO15255 209 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 CLPSL2Q6UWE3 100 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 RMI2Q96E14 147 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
LINC00339-205ENST00000452322 LINC01549A6NIU2 74 aa7.96□□□□□ -1.14
LINC00339-205ENST00000452322 ZNF664Q8N3J9 261 aa7.96□□□□□ -1.14
LINC00339-205ENST00000452322 TM2D2Q9BX73 214 aa7.96□□□□□ -1.14
LINC00339-205ENST00000452322 COX11Q9Y6N1 276 aa7.96□□□□□ -1.14
LINC00339-205ENST00000452322 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
LINC00339-205ENST00000452322 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
LINC00339-205ENST00000452322 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
LINC00339-205ENST00000452322 Q6ZUT4 128 aa7.95□□□□□ -1.14
LINC00339-205ENST00000452322 TOMM6Q96B49 74 aa7.95□□□□□ -1.14
LINC00339-205ENST00000452322 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
LINC00339-205ENST00000452322 C1orf43Q9BWL3 253 aa7.95□□□□□ -1.14
LINC00339-205ENST00000452322 IGKV2D-24A0A075B6R9 120 aa7.94□□□□□ -1.14
LINC00339-205ENST00000452322 NPSP0C0P6 89 aa7.94□□□□□ -1.14
LINC00339-205ENST00000452322 BAGE3Q86Y29 109 aa7.94□□□□□ -1.14
LINC00339-205ENST00000452322 IGLV4-3A0A075B6K6 122 aa7.93□□□□□ -1.14
LINC00339-205ENST00000452322 IGIPA6NJ69 53 aa7.93□□□□□ -1.14
LINC00339-205ENST00000452322 PSCAO43653 123 aa7.93□□□□□ -1.14
LINC00339-205ENST00000452322 FAM104AQ969W3 186 aa7.93□□□□□ -1.14
LINC00339-205ENST00000452322 TIMM17AQ99595 171 aa7.93□□□□□ -1.14
LINC00339-205ENST00000452322 A0A096LNJ9 63 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 IGKV3OR2-268A0A0C4DH90 116 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BKO60814 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HBDP02042 147 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BJP06899 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BOP23527 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BBP33778 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BDP58876 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BCP62807 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST2H2BEQ16778 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BHQ93079 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BNQ99877 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 HIST1H2BMQ99879 126 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 OPRPNQ99935 248 aaPredicted RBP7.92□□□□□ -1.14
LINC00339-205ENST00000452322 DNAH11Q96DT5 4516 aa7.92□□□□□ -1.14
LINC00339-205ENST00000452322 IGLV10-54A0A075B6I4 117 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 LINC00959A0A1B0GUT2 108 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 PRSS29PA6NIE9 313 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 TNP2Q05952 138 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 Q6ZN92 141 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 ERASQ7Z444 233 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
LINC00339-205ENST00000452322 HECTD4Q9Y4D8 3996 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 CCL25O15444 150 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 HSBP1O75506 76 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 SERF1AO75920 110 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 LINC00310P59036 64 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 SS18Q15532 418 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 PMCHL1Q16048 86 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 PAPPA-AS1Q5QFB9 102 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 KRTAP26-1Q6PEX3 210 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 TEX43Q6ZNM6 134 aa7.9□□□□□ -1.14
LINC00339-205ENST00000452322 PKD1P98161 4303 aa7.89□□□□□ -1.15
LINC00339-205ENST00000452322 IFITM10A6NMD0 228 aa7.89□□□□□ -1.15
LINC00339-205ENST00000452322 MAPKAPK5-AS1Q8N8E1 139 aa7.89□□□□□ -1.15
LINC00339-205ENST00000452322 CHCHD10Q8WYQ3 142 aaPredicted RBP7.89□□□□□ -1.15
LINC00339-205ENST00000452322 AMELXQ99217 191 aa7.89□□□□□ -1.15
LINC00339-205ENST00000452322 TRAV13-1A0A0B4J241 112 aa7.88□□□□□ -1.15
LINC00339-205ENST00000452322 LRCOL1A6NCL2 159 aa7.88□□□□□ -1.15
LINC00339-205ENST00000452322 PDZD11Q5EBL8 140 aa7.88□□□□□ -1.15
LINC00339-205ENST00000452322 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
LINC00339-205ENST00000452322 C2orf88Q9BSF0 95 aa7.88□□□□□ -1.15
LINC00339-205ENST00000452322 VCX2Q9H322 139 aa7.88□□□□□ -1.15
LINC00339-205ENST00000452322 A0A087WTM6 91 aa7.87□□□□□ -1.15
LINC00339-205ENST00000452322 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
LINC00339-205ENST00000452322 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.87□□□□□ -1.15
LINC00339-205ENST00000452322 XCL1P47992 114 aa7.87□□□□□ -1.15
LINC00339-205ENST00000452322 NUPR1O60356 82 aa7.86□□□□□ -1.15
LINC00339-205ENST00000452322 ATP5LO75964 103 aa7.86□□□□□ -1.15
LINC00339-205ENST00000452322 FOXI1Q12951 378 aa7.86□□□□□ -1.15
LINC00339-205ENST00000452322 CD164L2Q6UWJ8 174 aa7.86□□□□□ -1.15
LINC00339-205ENST00000452322 FAM19A2Q8N3H0 131 aa7.86□□□□□ -1.15
LINC00339-205ENST00000452322 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
LINC00339-205ENST00000452322 EPPK1P58107 5090 aaKnown RBP7.86□□□□□ -1.15
LINC00339-205ENST00000452322 EREGO14944 169 aa7.85□□□□□ -1.15
LINC00339-205ENST00000452322 UBE2D1P51668 147 aa7.85□□□□□ -1.15
LINC00339-205ENST00000452322 COA6Q5JTJ3 125 aaKnown RBP7.85□□□□□ -1.15
LINC00339-205ENST00000452322 ZC2HC1BQ5TFG8 222 aa7.85□□□□□ -1.15
LINC00339-205ENST00000452322 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
LINC00339-205ENST00000452322 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
LINC00339-205ENST00000452322 WFDC2Q14508 124 aa7.84□□□□□ -1.15
LINC00339-205ENST00000452322 PMVKQ15126 192 aa7.84□□□□□ -1.15
LINC00339-205ENST00000452322 FAM19A3Q7Z5A8 133 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms