RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PKDREJQ9NTG1 2253 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 ODF3BA8MYP8 253 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 LYNX1G3V0Z9 82 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 LYNX1P0DP58 116 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 KLK9Q2XQG4 91 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 HIST2H2BCQ6DN03 193 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 HIST2H2BDQ6DRA6 164 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 Q9H8V8 135 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 KLK9Q9UKQ9 250 aa6.27□□□□□ -1.41
LSM5-208ENST00000450169 ADGRG4Q8IZF6 3080 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 ATP6V0E1O15342 81 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 XCL1P47992 114 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 HILS1P60008 231 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 DEFB109BQ30KR1 87 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
LSM5-208ENST00000450169 OBSCN-AS1Q96MR7 158 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 OVOL2Q9BRP0 275 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 C16orf95Q9H693 158 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 XCL2Q9UBD3 114 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 CDKN2A-AS1Q9UH64 79 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 V9GYY9 64 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 ABCA4P78363 2273 aa6.26□□□□□ -1.41
LSM5-208ENST00000450169 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
LSM5-208ENST00000450169 NBL1P41271 181 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
LSM5-208ENST00000450169 IGFL2Q6UWQ7 119 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 LINC00482Q8N8I6 264 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 Q8N9W7 124 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 WFDC11Q8NEX6 87 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 POLEQ07864 2286 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 IGHV3-16A0A0C4DH30 117 aa6.25□□□□□ -1.41
LSM5-208ENST00000450169 TPRP12270 2363 aaKnown RBP6.25□□□□□ -1.41
LSM5-208ENST00000450169 SMIM26A0A096LP01 95 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 G3V318 75 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 H7BZZ5 65 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 IGF2RP11717 2491 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 SPTBN4Q9H254 2564 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 A0A087WYN8 130 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 EDN2P20800 178 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 MINOS1Q5TGZ0 78 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
LSM5-208ENST00000450169 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
LSM5-208ENST00000450169 TLN1Q9Y490 2541 aaKnown RBP6.24□□□□□ -1.41
LSM5-208ENST00000450169 IGKV3-7A0A075B6H7 116 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 IGLV5-45A0A087WSX0 123 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 KNCNA6PVL3 124 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 UNQ9165/PRO28630Q6UXU0 137 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 TRAV13-2A0A0B4J235 113 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 S100A7L2Q5SY68 101 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 C1orf195Q5TG92 126 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 WFDC9Q8NEX5 89 aa6.23□□□□□ -1.41
LSM5-208ENST00000450169 IGLV5-39A0A0G2JS06 123 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 E7EQL1 145 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 NCR3O14931 201 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 CRPP02741 224 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.22□□□□□ -1.41
LSM5-208ENST00000450169 PTPRQQ9UMZ3 2332 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 PIK3CD-AS1Q5SR53 167 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
LSM5-208ENST00000450169 PCNX1Q96RV3 2341 aa6.21□□□□□ -1.41
LSM5-208ENST00000450169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.21□□□□□ -1.42
LSM5-208ENST00000450169 IGKV2-29A2NJV5 120 aaPredicted RBP6.21□□□□□ -1.42
LSM5-208ENST00000450169 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.42
LSM5-208ENST00000450169 CHCHD7Q9BUK0 85 aa6.21□□□□□ -1.42
LSM5-208ENST00000450169 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
LSM5-208ENST00000450169 CCKP06307 115 aa6.2□□□□□ -1.42
LSM5-208ENST00000450169 LYPD5Q6UWN5 251 aa6.2□□□□□ -1.42
LSM5-208ENST00000450169 ENHOQ6UWT2 76 aa6.2□□□□□ -1.42
LSM5-208ENST00000450169 A0A1W2PRX2 142 aa6.2□□□□□ -1.42
LSM5-208ENST00000450169 IGHV3-73A0A0B4J1V6 119 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 H0YGX0 51 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 NDUFA4O00483 81 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 COX6A2Q02221 97 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 KLKP1Q107X0 134 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 LINC00337Q8N6G1 96 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 LINC00467Q9BRT7 94 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 MINOS1-NBL1R4GNA1 71 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 SPTA1P02549 2419 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 CHD8Q9HCK8 2581 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 LECT2O14960 151 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 IGFL3Q6UXB1 125 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
LSM5-208ENST00000450169 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 IGHV1OR15-1A0A075B7D0 117 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 CDSNQ15517 529 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 MIR7-3HGQ8N6C7 128 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 TRBV10-3A0A0K0K1G6 114 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 PROK1P58294 105 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 RHPN1-AS1Q9BWJ2 59 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 LINC00474Q9P2X8 69 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 ATRXP46100 2492 aa6.18□□□□□ -1.42
LSM5-208ENST00000450169 IGKV2-28A0A075B6P5 120 aa6.17□□□□□ -1.42
LSM5-208ENST00000450169 IGKV2D-28P01615 120 aa6.17□□□□□ -1.42
LSM5-208ENST00000450169 LINC00242Q5T6M2 205 aa6.17□□□□□ -1.42
LSM5-208ENST00000450169 NCOR2Q9Y618 2525 aa6.17□□□□□ -1.42
LSM5-208ENST00000450169 TRBV7-6A0A0J9YX20 115 aa6.16□□□□□ -1.42
LSM5-208ENST00000450169 BCE1O60756 84 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms