RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LINC00862A6NCI5 91 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 D6R8Y8 96 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 H7C423 109 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 FGF6P10767 208 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 POLR2KP53803 58 aaKnown RBP9.61□□□□□ -0.87
USP39-206ENST00000448971 NRACQ8N912 160 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 BTF3L4Q96K17 158 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 KIR2DL4Q99706 377 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
USP39-206ENST00000448971 GCSHP23434 173 aa9.6□□□□□ -0.87
USP39-206ENST00000448971 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
USP39-206ENST00000448971 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
USP39-206ENST00000448971 VCYO14598 125 aa9.59□□□□□ -0.87
USP39-206ENST00000448971 ZNF25P17030 456 aaPredicted RBP9.59□□□□□ -0.87
USP39-206ENST00000448971 TMEM101Q96IK0 257 aa9.59□□□□□ -0.87
USP39-206ENST00000448971 TRAV8-4A0A0B4J246 113 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 PPBPP02775 128 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 ESDP10768 282 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 C14orf177Q52M58 125 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
USP39-206ENST00000448971 USP17L23D6RBM5 183 aa9.57□□□□□ -0.88
USP39-206ENST00000448971 H3BS24 57 aa9.57□□□□□ -0.88
USP39-206ENST00000448971 NPYP01303 97 aa9.57□□□□□ -0.88
USP39-206ENST00000448971 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
USP39-206ENST00000448971 SMIM2Q9BVW6 85 aa9.57□□□□□ -0.88
USP39-206ENST00000448971 CTDSP1Q9GZU7 261 aa9.57□□□□□ -0.88
USP39-206ENST00000448971 TRBV24-1A0A075B6N3 115 aa9.56□□□□□ -0.88
USP39-206ENST00000448971 SMR3BP02814 79 aaPredicted RBP9.56□□□□□ -0.88
USP39-206ENST00000448971 PHOX2AO14813 284 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 S100PP25815 95 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 SMAGPQ0VAQ4 97 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 TMEM136Q6ZRR5 245 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 IMMP2LQ96T52 175 aa9.55□□□□□ -0.88
USP39-206ENST00000448971 TCAPO15273 167 aa9.54□□□□□ -0.88
USP39-206ENST00000448971 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
USP39-206ENST00000448971 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
USP39-206ENST00000448971 MRPL52Q86TS9 123 aaKnown RBP9.54□□□□□ -0.88
USP39-206ENST00000448971 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
USP39-206ENST00000448971 DNAH8Q96JB1 4490 aa9.53□□□□□ -0.88
USP39-206ENST00000448971 GAGE12HA6NDE8 117 aa9.53□□□□□ -0.88
USP39-206ENST00000448971 CARHSP1Q9Y2V2 147 aaKnown RBP9.53□□□□□ -0.88
USP39-206ENST00000448971 TRAV9-1A0A075B6T8 112 aa9.52□□□□□ -0.89
USP39-206ENST00000448971 RHEBQ15382 184 aa9.52□□□□□ -0.89
USP39-206ENST00000448971 CHCHD10Q8WYQ3 142 aaPredicted RBP9.52□□□□□ -0.89
USP39-206ENST00000448971 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
USP39-206ENST00000448971 RPS10P5Q9NQ39 176 aa9.52□□□□□ -0.89
USP39-206ENST00000448971 LAMTOR2Q9Y2Q5 125 aa9.52□□□□□ -0.89
USP39-206ENST00000448971 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.89
USP39-206ENST00000448971 RAB5AP20339 215 aa9.51□□□□□ -0.89
USP39-206ENST00000448971 HAMPP81172 84 aa9.51□□□□□ -0.89
USP39-206ENST00000448971 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
USP39-206ENST00000448971 LINC01620Q4KN68 170 aa9.51□□□□□ -0.89
USP39-206ENST00000448971 C10orf91Q5T1B1 145 aa9.51□□□□□ -0.89
USP39-206ENST00000448971 CLRN3Q8NCR9 226 aa9.51□□□□□ -0.89
USP39-206ENST00000448971 LOC389332A0A1B0GUA5 103 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 hDV102S1A0JD36 115 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 PRSS1P07477 247 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 XCL1P47992 114 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 C21orf62-AS1Q17RA5 79 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 ZNF664Q8N3J9 261 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
USP39-206ENST00000448971 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
USP39-206ENST00000448971 CCL25O15444 150 aa9.49□□□□□ -0.89
USP39-206ENST00000448971 APOC3P02656 99 aa9.49□□□□□ -0.89
USP39-206ENST00000448971 SS18Q15532 418 aa9.49□□□□□ -0.89
USP39-206ENST00000448971 RNASE13Q5GAN3 156 aaKnown RBP9.49□□□□□ -0.89
USP39-206ENST00000448971 Q6ZUT4 128 aa9.49□□□□□ -0.89
USP39-206ENST00000448971 RPL39P62891 51 aaKnown RBP9.48□□□□□ -0.89
USP39-206ENST00000448971 AP5S1Q9NUS5 200 aa9.48□□□□□ -0.89
USP39-206ENST00000448971 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
USP39-206ENST00000448971 CFAP161Q6P656 301 aa9.47□□□□□ -0.89
USP39-206ENST00000448971 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
USP39-206ENST00000448971 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
USP39-206ENST00000448971 SNAPINO95295 136 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 FOXI1Q12951 378 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 HIGD2BQ4VC39 106 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 SVBPQ8N300 66 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 C15orf56Q8N910 161 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.9
USP39-206ENST00000448971 TRAV13-1A0A0B4J241 112 aa9.45□□□□□ -0.9
USP39-206ENST00000448971 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
USP39-206ENST00000448971 COX19Q49B96 90 aa9.45□□□□□ -0.9
USP39-206ENST00000448971 Q8N8P6 123 aa9.45□□□□□ -0.9
USP39-206ENST00000448971 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.44□□□□□ -0.9
USP39-206ENST00000448971 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
USP39-206ENST00000448971 MT-ND6P03923 174 aa9.44□□□□□ -0.9
USP39-206ENST00000448971 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
USP39-206ENST00000448971 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
USP39-206ENST00000448971 UBR4Q5T4S7 5183 aa9.43□□□□□ -0.9
USP39-206ENST00000448971 IFITM10A6NMD0 228 aa9.43□□□□□ -0.9
USP39-206ENST00000448971 C1orf196B1AJZ1 125 aa9.43□□□□□ -0.9
USP39-206ENST00000448971 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
USP39-206ENST00000448971 ORMDL2Q53FV1 153 aa9.43□□□□□ -0.9
USP39-206ENST00000448971 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
USP39-206ENST00000448971 Q6ZSA8 131 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms