RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 KIF26AQ9ULI4 1882 aaPredicted RBP6.82□□□□□ -1.32
NIPBL-202ENST00000448238 LST1O00453 97 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 LY6HO94772 140 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 SPRY2O43597 315 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 HILS1P60008 231 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 SYCNQ0VAF6 134 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 RNF144BQ7Z419 303 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 ACYP2P14621 99 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 SLPIP03973 132 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 RNASE3P12724 160 aaKnown RBP6.81□□□□□ -1.32
NIPBL-202ENST00000448238 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
NIPBL-202ENST00000448238 A8MZ25 164 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 CRYGAP11844 174 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 C22orf34Q6ZV56 151 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 ODF3Q96PU9 254 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 SLURP1P55000 103 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
NIPBL-202ENST00000448238 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.8□□□□□ -1.32
NIPBL-202ENST00000448238 H0Y9P7 68 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 MRPS12O15235 138 aaKnown RBP6.8□□□□□ -1.32
NIPBL-202ENST00000448238 TP73-AS1Q9UF72 201 aa6.8□□□□□ -1.32
NIPBL-202ENST00000448238 A0A087WV48 116 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 DCANP1Q8TF63 244 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
NIPBL-202ENST00000448238 BEAN1Q3B7T3 259 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 FOXL2NBQ6ZUU3 175 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 C15orf65H3BRN8 121 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
NIPBL-202ENST00000448238 MYCNOSP40205 109 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 C4orf3Q8WVX3 66 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 PINLYPA6NC86 204 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 ZNRD1Q9P1U0 126 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 IGLV9-49A0A0B4J1Y8 123 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 C19orf71A6NCJ1 209 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 TPSG1Q9NRR2 321 aa6.78□□□□□ -1.32
NIPBL-202ENST00000448238 USP9XQ93008 2570 aaPredicted RBP6.78□□□□□ -1.32
NIPBL-202ENST00000448238 IGLV11-55A0A075B6I3 123 aa6.77□□□□□ -1.32
NIPBL-202ENST00000448238 NTM-AS1Q6ZSK4 140 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 SETD2Q9BYW2 2564 aaPredicted RBP6.77□□□□□ -1.33
NIPBL-202ENST00000448238 IGLV4-69A0A075B6H9 119 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 MGAMO43451 1857 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 ADAMTS20P59510 1910 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 PRM2P04554 102 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 MSRB1Q9NZV6 116 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 TRAV10A0A0B4J240 114 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 SPINK1P00995 79 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 NRGNQ92686 78 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 Q8N6K4 173 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 IGKV2-28A0A075B6P5 120 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 IGKV2D-28P01615 120 aa6.77□□□□□ -1.33
NIPBL-202ENST00000448238 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
NIPBL-202ENST00000448238 IGHV7-81A0A0B4J1V7 117 aa6.76□□□□□ -1.33
NIPBL-202ENST00000448238 TTTY13Q9BZ97 58 aa6.76□□□□□ -1.33
NIPBL-202ENST00000448238 CDKN2A-AS1Q9UH64 79 aa6.76□□□□□ -1.33
NIPBL-202ENST00000448238 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 MAPK1IP1LQ8NDC0 245 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 LOC100131303A0A0U1RQF7 123 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 ZNF73O43830 326 aaPredicted RBP6.75□□□□□ -1.33
NIPBL-202ENST00000448238 CD164L2Q6UWJ8 174 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 K7EIM0 57 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
NIPBL-202ENST00000448238 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 I3L2K1 104 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 PRLHP81277 87 aa6.75□□□□□ -1.33
NIPBL-202ENST00000448238 Q0VFX4 171 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 FSHBP01225 129 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 C1orf137Q5JT78 98 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 Q8N3U1 123 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 TRBV6-8A0A0A6YYG3 113 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 EPOPA6NHQ4 379 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 CSRP3P50461 194 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 ADAMTSL1Q8N6G6 1762 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 RAI1Q7Z5J4 1906 aaPredicted RBP6.74□□□□□ -1.33
NIPBL-202ENST00000448238 ZNF843Q8N446 348 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 A0A0J9YX75 114 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 POM121L12Q8N7R1 296 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 LINC00467Q9BRT7 94 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 LUZP6Q538Z0 58 aa6.74□□□□□ -1.33
NIPBL-202ENST00000448238 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 ZNF702PQ9H963 129 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 PLAC8L1A1L4L8 177 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 PATE2Q6UY27 113 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 CIRBP-AS1Q8TBR5 109 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 SMIM11BQ8TCY0 68 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 C7orf65Q6ZTY9 151 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 CTSZQ9UBR2 303 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 IGHV6-1A0A0B4J1U7 121 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 J3QKU1 62 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 P0C879 139 aa6.73□□□□□ -1.33
NIPBL-202ENST00000448238 NUPR1O60356 82 aa6.72□□□□□ -1.33
NIPBL-202ENST00000448238 IGLV4-3A0A075B6K6 122 aa6.72□□□□□ -1.33
NIPBL-202ENST00000448238 RBX1P62877 108 aa6.71□□□□□ -1.33
NIPBL-202ENST00000448238 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms