RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 CARD19Q96LW7 228 aa3.49□□□□□ -1.85
USP49-205ENST00000448078 NAA50Q9GZZ1 169 aaKnown RBP3.49□□□□□ -1.85
USP49-205ENST00000448078 CARHSP1Q9Y2V2 147 aaKnown RBP3.49□□□□□ -1.85
USP49-205ENST00000448078 GVQW2A0A096LPI5 108 aaPredicted RBP3.48□□□□□ -1.85
USP49-205ENST00000448078 IGHV1-58A0A0C4DH39 117 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 H0Y9J4 135 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 TSPAN13O95857 204 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 MBP02144 154 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 UBE2G1P62253 170 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 SYCNQ0VAF6 134 aa3.48□□□□□ -1.85
USP49-205ENST00000448078 LPAP08519 4548 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 TMSB15BA0A087X1C1 80 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 CXorf1O96002 111 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 PET100P0DJ07 73 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 RPL12P30050 165 aaKnown RBP3.47□□□□□ -1.85
USP49-205ENST00000448078 COTL1Q14019 142 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 NTM-AS1Q6ZSK4 140 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 C20orf203Q8NBC4 194 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 CHCHD10Q8WYQ3 142 aaPredicted RBP3.47□□□□□ -1.85
USP49-205ENST00000448078 HIST1H2BAQ96A08 127 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 TMEM101Q96IK0 257 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 BTF3L4Q96K17 158 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 SDHCQ99643 169 aaPredicted RBP3.47□□□□□ -1.85
USP49-205ENST00000448078 ARL2-SNX15V9GYD0 113 aa3.47□□□□□ -1.85
USP49-205ENST00000448078 A0A1W2PRE2 83 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 SH2D1AO60880 128 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 ARL14EPLP0DKL9 152 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 GCHFRP30047 84 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 CDC34P49427 236 aaPredicted RBP3.46□□□□□ -1.86
USP49-205ENST00000448078 SS18Q15532 418 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 RNASEKQ6P5S7 137 aaKnown RBP3.46□□□□□ -1.86
USP49-205ENST00000448078 C15orf56Q8N910 161 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 AP1S3Q96PC3 154 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 ACTR3CQ9C0K3 210 aaPredicted RBP3.46□□□□□ -1.86
USP49-205ENST00000448078 C11orf1Q9H5F2 150 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 PRO0461Q9UI25 63 aa3.46□□□□□ -1.86
USP49-205ENST00000448078 IGLV4-69A0A075B6H9 119 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 FAM168BA1KXE4 195 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 HMGB3O15347 200 aaKnown RBP3.45□□□□□ -1.86
USP49-205ENST00000448078 S100A9P06702 114 aaKnown RBP3.45□□□□□ -1.86
USP49-205ENST00000448078 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 CRYGAP11844 174 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 SSTP61278 116 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 C9orf116Q5BN46 136 aaPredicted RBP3.45□□□□□ -1.86
USP49-205ENST00000448078 LINC00242Q5T6M2 205 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 LINC00337Q8N6G1 96 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 FMC1Q96HJ9 113 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 CCDC32Q9BV29 185 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 MED28Q9H204 178 aa3.45□□□□□ -1.86
USP49-205ENST00000448078 PEX7O00628 323 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 APOMO95445 188 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 MGPP08493 103 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 STAG3L2P0CL84 134 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 STAG3L3P0CL85 134 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 XCL1P47992 114 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 UBE2BP63146 152 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 SERF2P84101 59 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 RPL18AQ02543 176 aaKnown RBP3.44□□□□□ -1.86
USP49-205ENST00000448078 SMAGPQ0VAQ4 97 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 IL15RAQ13261 267 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 RASL11AQ6T310 242 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 CAMK2N2Q96S95 79 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 IMMP2LQ96T52 175 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 NIT2Q9NQR4 276 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
USP49-205ENST00000448078 A0A1W2PNN7 141 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 CCDC160A6NGH7 325 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 CCL25O15444 150 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 CXCL1P09341 107 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 OR5AL1P0C617 328 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 ZNF25P17030 456 aaPredicted RBP3.43□□□□□ -1.86
USP49-205ENST00000448078 CRIP1P50238 77 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 NKX2-5P52952 324 aaPredicted RBP3.43□□□□□ -1.86
USP49-205ENST00000448078 OR5A1Q8NGJ0 315 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 STOML3Q8TAV4 291 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 SEC22CQ9BRL7 303 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 TCEAL7Q9BRU2 100 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 SMIM3Q9BZL3 60 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 HSPB11Q9Y547 144 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 V9GYH0 126 aa3.43□□□□□ -1.86
USP49-205ENST00000448078 FAM240BA0A1B0GVZ2 78 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 XKRY2A2RUG3 117 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 F8WDY8 70 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 M0QY20 66 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 NCR2O95944 276 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 TRGC1P0CF51 173 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 CD164L2Q6UWJ8 174 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 PHF5AQ7RTV0 110 aaKnown RBP3.42□□□□□ -1.86
USP49-205ENST00000448078 SMIM15Q7Z3B0 74 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 Q86TA4 180 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 OR2D3Q8NGH3 330 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 OR10AG1Q8NH19 301 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 FAM210AQ96ND0 272 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 NUDT15Q9NV35 164 aa3.42□□□□□ -1.86
USP49-205ENST00000448078 TNFSF18Q9UNG2 199 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms