RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 RS1O15537 224 aa11.79□□□□□ -0.52
OTUB1-204ENST00000447683 C1orf158Q8N1D5 194 aa11.79□□□□□ -0.52
OTUB1-204ENST00000447683 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
OTUB1-204ENST00000447683 HILS1P60008 231 aa11.78□□□□□ -0.52
OTUB1-204ENST00000447683 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
OTUB1-204ENST00000447683 IL17DQ8TAD2 202 aa11.78□□□□□ -0.52
OTUB1-204ENST00000447683 Q9UF83 564 aa11.77□□□□□ -0.52
OTUB1-204ENST00000447683 ANK3Q12955 4377 aaKnown RBP11.77□□□□□ -0.53
OTUB1-204ENST00000447683 CMC4P56277 68 aaPredicted RBP11.77□□□□□ -0.53
OTUB1-204ENST00000447683 PLEKHB2Q96CS7 222 aa11.77□□□□□ -0.53
OTUB1-204ENST00000447683 RPS28P62857 69 aaKnown RBP11.76□□□□□ -0.53
OTUB1-204ENST00000447683 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
OTUB1-204ENST00000447683 NF1P21359 2839 aa11.76□□□□□ -0.53
OTUB1-204ENST00000447683 ADARB2-AS1A8MUL3 147 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 NDUFA7O95182 113 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 TSPEAR-AS2P59090 65 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 OR13C6PQ8NH95 151 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 AMELXQ99217 191 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 SCGB1D4Q6XE38 83 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
OTUB1-204ENST00000447683 TMEM223A0PJW6 202 aa11.74□□□□□ -0.53
OTUB1-204ENST00000447683 J3KT08 172 aa11.74□□□□□ -0.53
OTUB1-204ENST00000447683 IGLV1-51P01701 117 aa11.74□□□□□ -0.53
OTUB1-204ENST00000447683 ITPR2Q14571 2701 aa11.74□□□□□ -0.53
OTUB1-204ENST00000447683 A0A0J9YY99 117 aa11.74□□□□□ -0.53
OTUB1-204ENST00000447683 ZNF22P17026 224 aaPredicted RBP11.74□□□□□ -0.53
OTUB1-204ENST00000447683 UBE2D3P61077 147 aa11.73□□□□□ -0.53
OTUB1-204ENST00000447683 UBE2D2P62837 147 aa11.73□□□□□ -0.53
OTUB1-204ENST00000447683 HELZ2Q9BYK8 2649 aaKnown RBP11.73□□□□□ -0.53
OTUB1-204ENST00000447683 IGHV3OR16-12A0A075B7B8 117 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 J3QQQ9 107 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 SCGB1C2P0DMR2 95 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 LEPROTO15243 131 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 LINC01600Q96MT4 127 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 MTORP42345 2549 aa11.72□□□□□ -0.53
OTUB1-204ENST00000447683 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.53
OTUB1-204ENST00000447683 TMEM263Q8WUH6 116 aaKnown RBP11.71□□□□□ -0.53
OTUB1-204ENST00000447683 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
OTUB1-204ENST00000447683 MRPS36P82909 103 aaKnown RBP11.71□□□□□ -0.54
OTUB1-204ENST00000447683 MRAPQ8TCY5 172 aa11.71□□□□□ -0.54
OTUB1-204ENST00000447683 UBE2D4Q9Y2X8 147 aa11.71□□□□□ -0.54
OTUB1-204ENST00000447683 CUBNO60494 3623 aa11.71□□□□□ -0.54
OTUB1-204ENST00000447683 TRAV4A0A0B4J268 109 aa11.7□□□□□ -0.54
OTUB1-204ENST00000447683 SRSF9Q13242 221 aaKnown RBP eCLIP11.7□□□□□ -0.54
OTUB1-204ENST00000447683 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
OTUB1-204ENST00000447683 LGALS3P17931 250 aaKnown RBP11.7□□□□□ -0.54
OTUB1-204ENST00000447683 CEMP1Q6PRD7 247 aaPredicted RBP11.7□□□□□ -0.54
OTUB1-204ENST00000447683 SLC25A29Q8N8R3 303 aa11.7□□□□□ -0.54
OTUB1-204ENST00000447683 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
OTUB1-204ENST00000447683 UBE2D1P51668 147 aa11.69□□□□□ -0.54
OTUB1-204ENST00000447683 PSMB2P49721 201 aa11.68□□□□□ -0.54
OTUB1-204ENST00000447683 SMR3AQ99954 134 aa11.68□□□□□ -0.54
OTUB1-204ENST00000447683 IGHV3-38A0A0C4DH36 116 aa11.68□□□□□ -0.54
OTUB1-204ENST00000447683 WFDC10AQ9H1F0 79 aa11.68□□□□□ -0.54
OTUB1-204ENST00000447683 SETD2Q9BYW2 2564 aaPredicted RBP11.67□□□□□ -0.54
OTUB1-204ENST00000447683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.67□□□□□ -0.54
OTUB1-204ENST00000447683 IGKV2-29A2NJV5 120 aaPredicted RBP11.67□□□□□ -0.54
OTUB1-204ENST00000447683 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
OTUB1-204ENST00000447683 Q6ZTI0 123 aa11.67□□□□□ -0.54
OTUB1-204ENST00000447683 TRBV10-1A0A0K0K1A3 114 aa11.66□□□□□ -0.54
OTUB1-204ENST00000447683 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
OTUB1-204ENST00000447683 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
OTUB1-204ENST00000447683 ANKRD29Q8N6D5 301 aa11.66□□□□□ -0.54
OTUB1-204ENST00000447683 PLAC8L1A1L4L8 177 aa11.65□□□□□ -0.54
OTUB1-204ENST00000447683 C9JAW5 83 aa11.65□□□□□ -0.54
OTUB1-204ENST00000447683 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
OTUB1-204ENST00000447683 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.54
OTUB1-204ENST00000447683 RNASE13Q5GAN3 156 aaKnown RBP11.65□□□□□ -0.54
OTUB1-204ENST00000447683 CSNK1G2-AS1Q8NCQ2 148 aa11.65□□□□□ -0.54
OTUB1-204ENST00000447683 IMUPQ9GZP8 106 aa11.65□□□□□ -0.54
OTUB1-204ENST00000447683 HIVEP2P31629 2446 aa11.65□□□□□ -0.55
OTUB1-204ENST00000447683 K7EQD1 137 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 ATP5G1P05496 136 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 LINC00694P0DN24 101 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 KRTAP10-3P60369 221 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 C16orf74Q96GX8 76 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
OTUB1-204ENST00000447683 RPL35AP18077 110 aaKnown RBP11.64□□□□□ -0.55
OTUB1-204ENST00000447683 FAM19A5Q7Z5A7 132 aaPredicted RBP11.64□□□□□ -0.55
OTUB1-204ENST00000447683 NOP10Q9NPE3 64 aaKnown RBP11.64□□□□□ -0.55
OTUB1-204ENST00000447683 F8WDY8 70 aa11.63□□□□□ -0.55
OTUB1-204ENST00000447683 CRLF1O75462 422 aa11.63□□□□□ -0.55
OTUB1-204ENST00000447683 LY6G6DO95868 133 aa11.63□□□□□ -0.55
OTUB1-204ENST00000447683 IGHV3-30-3P0DP02 117 aa11.63□□□□□ -0.55
OTUB1-204ENST00000447683 RPL13AP40429 203 aaKnown RBP11.63□□□□□ -0.55
OTUB1-204ENST00000447683 TRBV7-7A0A0K0K1E9 115 aa11.63□□□□□ -0.55
OTUB1-204ENST00000447683 RPL36AP83881 106 aaKnown RBP11.63□□□□□ -0.55
OTUB1-204ENST00000447683 RPL36ALQ969Q0 106 aaKnown RBP11.63□□□□□ -0.55
OTUB1-204ENST00000447683 FASNP49327 2511 aaKnown RBP11.62□□□□□ -0.55
OTUB1-204ENST00000447683 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
OTUB1-204ENST00000447683 LOC107984156A0A0G2JMH3 177 aa11.61□□□□□ -0.55
OTUB1-204ENST00000447683 FAM240AA0A1B0GVK7 77 aa11.61□□□□□ -0.55
OTUB1-204ENST00000447683 ARL17AQ8IVW1 177 aa11.61□□□□□ -0.55
OTUB1-204ENST00000447683 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
OTUB1-204ENST00000447683 OVOL2Q9BRP0 275 aa11.61□□□□□ -0.55
OTUB1-204ENST00000447683 DAZ4Q86SG3 579 aaKnown RBP11.61□□□□□ -0.55
OTUB1-204ENST00000447683 DAZ3Q9NR90 486 aaKnown RBP11.61□□□□□ -0.55
OTUB1-204ENST00000447683 JMJD1CQ15652 2540 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms