RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 COTL1Q14019 142 aa9.6□□□□□ -0.87
SREBF1-207ENST00000447641 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
SREBF1-207ENST00000447641 K7EP13 123 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 NUPR1O60356 82 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 C1orf134Q5TEV5 83 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 FAM19A2Q8N3H0 131 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 URB1-AS1Q96HZ7 61 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 CYSLTR1Q9Y271 337 aa9.59□□□□□ -0.87
SREBF1-207ENST00000447641 IFITM10A6NMD0 228 aa9.58□□□□□ -0.88
SREBF1-207ENST00000447641 GAS8-AS1O95177 125 aa9.58□□□□□ -0.88
SREBF1-207ENST00000447641 TRAV8-6A0A0B4J262 113 aa9.57□□□□□ -0.88
SREBF1-207ENST00000447641 IGHV3-38A0A0C4DH36 116 aa9.57□□□□□ -0.88
SREBF1-207ENST00000447641 KRTDAPP60985 99 aa9.57□□□□□ -0.88
SREBF1-207ENST00000447641 LINC01556Q5JQF7 62 aa9.57□□□□□ -0.88
SREBF1-207ENST00000447641 C6orf223Q8N319 242 aa9.57□□□□□ -0.88
SREBF1-207ENST00000447641 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
SREBF1-207ENST00000447641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.56□□□□□ -0.88
SREBF1-207ENST00000447641 NPSP0C0P6 89 aa9.56□□□□□ -0.88
SREBF1-207ENST00000447641 S100A12P80511 92 aa9.56□□□□□ -0.88
SREBF1-207ENST00000447641 JOSD1Q15040 202 aaPredicted RBP9.56□□□□□ -0.88
SREBF1-207ENST00000447641 PET117Q6UWS5 81 aa9.56□□□□□ -0.88
SREBF1-207ENST00000447641 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
SREBF1-207ENST00000447641 TMEM141Q96I45 108 aa9.56□□□□□ -0.88
SREBF1-207ENST00000447641 TRAV9-2A0A087WT02 112 aa9.55□□□□□ -0.88
SREBF1-207ENST00000447641 SCGB1D1O95968 90 aa9.55□□□□□ -0.88
SREBF1-207ENST00000447641 PMCHL1Q16048 86 aa9.55□□□□□ -0.88
SREBF1-207ENST00000447641 Q6ZN92 141 aa9.55□□□□□ -0.88
SREBF1-207ENST00000447641 IFI27L1Q96BM0 104 aa9.55□□□□□ -0.88
SREBF1-207ENST00000447641 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
SREBF1-207ENST00000447641 C2orf66Q6UXQ4 117 aa9.54□□□□□ -0.88
SREBF1-207ENST00000447641 Q6ZRN7 208 aaPredicted RBP9.54□□□□□ -0.88
SREBF1-207ENST00000447641 NTM-AS1Q6ZSK4 140 aa9.54□□□□□ -0.88
SREBF1-207ENST00000447641 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
SREBF1-207ENST00000447641 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
SREBF1-207ENST00000447641 H7C423 109 aa9.53□□□□□ -0.88
SREBF1-207ENST00000447641 TSHBP01222 138 aa9.53□□□□□ -0.88
SREBF1-207ENST00000447641 PKIAP61925 76 aa9.53□□□□□ -0.88
SREBF1-207ENST00000447641 ERASQ7Z444 233 aa9.53□□□□□ -0.88
SREBF1-207ENST00000447641 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
SREBF1-207ENST00000447641 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
SREBF1-207ENST00000447641 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
SREBF1-207ENST00000447641 C3orf79P0CE67 100 aa9.52□□□□□ -0.89
SREBF1-207ENST00000447641 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
SREBF1-207ENST00000447641 SPANXA1Q9NS26 97 aa9.52□□□□□ -0.89
SREBF1-207ENST00000447641 TRBV25-1A0A075B6N4 114 aa9.51□□□□□ -0.89
SREBF1-207ENST00000447641 UBE2L6O14933 153 aa9.51□□□□□ -0.89
SREBF1-207ENST00000447641 PRSS1P07477 247 aa9.51□□□□□ -0.89
SREBF1-207ENST00000447641 Q8N3U1 123 aa9.51□□□□□ -0.89
SREBF1-207ENST00000447641 C20orf203Q8NBC4 194 aa9.51□□□□□ -0.89
SREBF1-207ENST00000447641 A0A096LNJ9 63 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
SREBF1-207ENST00000447641 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 TNP2Q05952 138 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 NFE4Q86UQ8 179 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 C12orf57Q99622 126 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 TIMM21Q9BVV7 248 aa9.49□□□□□ -0.89
SREBF1-207ENST00000447641 PYY3Q5JQD4 70 aa9.48□□□□□ -0.89
SREBF1-207ENST00000447641 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
SREBF1-207ENST00000447641 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
SREBF1-207ENST00000447641 PLNP26678 52 aa9.47□□□□□ -0.89
SREBF1-207ENST00000447641 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
SREBF1-207ENST00000447641 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
SREBF1-207ENST00000447641 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
SREBF1-207ENST00000447641 FAT1Q14517 4588 aa9.46□□□□□ -0.89
SREBF1-207ENST00000447641 H0Y8G0 127 aa9.46□□□□□ -0.9
SREBF1-207ENST00000447641 PMVKQ15126 192 aa9.46□□□□□ -0.9
SREBF1-207ENST00000447641 AMMECR1LQ6DCA0 310 aa9.46□□□□□ -0.9
SREBF1-207ENST00000447641 VAMP8Q9BV40 100 aa9.46□□□□□ -0.9
SREBF1-207ENST00000447641 VCX2Q9H322 139 aa9.46□□□□□ -0.9
SREBF1-207ENST00000447641 MYCBP2O75592 4640 aa9.45□□□□□ -0.9
SREBF1-207ENST00000447641 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
SREBF1-207ENST00000447641 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
SREBF1-207ENST00000447641 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
SREBF1-207ENST00000447641 VPS13BQ7Z7G8 4022 aa9.45□□□□□ -0.9
SREBF1-207ENST00000447641 A0A087WX48 190 aa9.44□□□□□ -0.9
SREBF1-207ENST00000447641 DPM2O94777 84 aa9.44□□□□□ -0.9
SREBF1-207ENST00000447641 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
SREBF1-207ENST00000447641 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
SREBF1-207ENST00000447641 TEX43Q6ZNM6 134 aa9.44□□□□□ -0.9
SREBF1-207ENST00000447641 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
SREBF1-207ENST00000447641 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 A0A1B0GUV1 79 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 TMEM262E9PQX1 116 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 F8VRH5 84 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 RPL39P62891 51 aaKnown RBP9.43□□□□□ -0.9
SREBF1-207ENST00000447641 SEC11AP67812 179 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 LINC00173Q6ZV60 143 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 KLK12Q9UKR0 248 aa9.43□□□□□ -0.9
SREBF1-207ENST00000447641 CHTOPQ9Y3Y2 248 aaKnown RBP9.43□□□□□ -0.9
SREBF1-207ENST00000447641 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms